Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tinamus_20guttatus_20[refseq_20GCF_5F000705375.1_202014-08-05] 82,514 sequences; 1,047,056,493 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq10844 123 5e-23 >seq10844 Length=18256 Score = 123 bits (136), Expect = 5e-23 Identities = 128/165 (78%), Gaps = 2/165 (1%) Strand=Plus/Plus Query 213528 GTGTACTCCATGATCTCGGTGCACAGGTTGCTGCATCGGATGGTGCCCAGGTTCTGGTGG 213587 |||||||||| |||||| ||||||||||||||||| |||||| ||||||||||| ||| Sbjct 6820 GTGTACTCCACGATCTCCGTGCACAGGTTGCTGCACTTGATGGTCCCCAGGTTCTGCTGG 6879 Query 213588 TTTGACTTTGCGTTGGCA-GAATCCTTGTAGAGCATGTAGGGGGACCCGGTCTCTAGCTG 213646 ||| ||||| | ||| || |||||||||||||||||||||| || ||||| ||| Sbjct 6880 -TTGCTCTTGCGGTTGCAGGAGTCCTTGTAGAGCATGTAGGGGGTGCCCGTCTCCGTCTG 6938 Query 213647 GGACACCAGTATCTGGCTCCAGAGGTACCTGGCCTTGACCACCCG 213691 ||| | | ||| | ||| || | | |||||| ||||| || Sbjct 6939 CGACTCGATGATCGCGTACCACAGCTGCTGGGCCTTCACCACGCG 6983 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 930571993781760