Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tinamus_20guttatus_20[refseq_20GCF_5F000705375.1_202014-08-05] 82,514 sequences; 1,047,056,493 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq11249 89.7 3e-12 >seq11249 Length=37093 Score = 89.7 bits (98), Expect = 3e-12 Identities = 136/191 (71%), Gaps = 7/191 (4%) Strand=Plus/Minus Query 474511 TATTTTT---GATGCTAAAAGATTGATTGGTCGTAATTTTGATGATACCACTGTCCAATC 474567 ||||||| ||||||||| | |||||||| |||| || |||||| | ||| || || Sbjct 18807 TATTTTTTCAGATGCTAAACGGTTGATTGGGCGTAGATTCGATGATTCTGTTGTTCAGTC 18748 Query 474568 TGATATGCGTCATTGGCCTTTTAAGGTGATAAATGTTGGTGGTAAACCATATATAGAAGC 474627 ||||||| || |||||||| | ||| | || | || ||||| |||| | | | | Sbjct 18747 TGATATGAAGCACTGGCCTTTCACCGTGGTGAACGATGCTGGTAGACCAAAAGTCCAGGT 18688 Query 474628 --AATACACGCAGGTGAAACTAAACAATTTTCACCGGAACAAATTTCTTCAATGGTTTTA 474685 | |||| ||| || || || || | || ||| |||||||||||||||||||| Sbjct 18687 CGAGTACAA--AGGAGAGACCAAGAGCTTCTACCCAGAAGAAATTTCTTCAATGGTTTTA 18630 Query 474686 GCCAAAATGAA 474696 |||| ||||| Sbjct 18629 ACCAAGATGAA 18619 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3264639774182072