Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tinamus_20guttatus_20[refseq_20GCF_5F000705375.1_202014-08-05] 82,514 sequences; 1,047,056,493 total letters Query= NC_020864.1 Length=205622 Score E Sequences producing significant alignments: (Bits) Value seq5265 338 8e-88 seq5912 190 3e-43 seq11249 181 1e-40 seq8606 170 3e-37 seq5934 96.9 5e-15 >seq5265 Length=134520 Score = 338 bits (374), Expect = 8e-88 Identities = 1039/1593 (65%), Gaps = 29/1593 (2%) Strand=Plus/Plus Query 195299 GCTATTGGTATCGATTTAGGAACTACTTACTCATGTGTTGGTGTATGGCAAAATGATCGT 195358 || || || ||||| || || || || || || || || || || | || ||| Sbjct 84398 GCGATCGGCATCGACTTGGGCACCACGTATTCCTGCGTGGGCGTCTTCCAGCATGGCAAA 84457 Query 195359 GTAGAGATTATCCCGAATGACCAAGGAAACCGTACAACTCCATCGTACGTTGCCTTTACA 195418 || ||||| || | || ||||| || ||||| || || || || || ||||| || Sbjct 84458 GTGGAGATCATTGCCAACGACCAGGGCAACCGCACCACACCCAGCTATGTGGCCTTCACC 84517 Query 195419 GATAATGAACGTCTCGTTGGAGATGCCGCAAAAAATCAGACAGCTATGAACCCTATCAAT 195478 |||| ||| || ||| | || ||||| || || || || ||||||||||| | ||| Sbjct 84518 GATACTGAGCGCCTCATCGGCGATGCTGCCAAGAACCAAGTGGCTATGAACCCCACCAAC 84577 Query 195479 ACTGTCTTTGACGCGAAGCGTCTTATTGGTCGCAAGTTTTCGGATAAGAAAGTCCAAGAC 195538 || |||| || || ||||| || || || ||||||| | || | || || Sbjct 84578 ACCATCTTCGATGCCAAGCGCCTCATCGGCCGCAAGTATGATGACCCCACGGTGCAGTCA 84637 Query 195539 GATATAAAGGACTGGTCTTATGAAGTTGTTCCCG-GTGTGGCTGATAAGCCTATGATTAA 195597 ||||| ||| ||||| | | || || | | ||||| ||||| | | | | Sbjct 84638 GATATGAAGCACTGGCCCTTCCGTGTGGTGAATGAGAGTGGC----AAGCCCAAGGTGCA 84693 Query 195598 TGTTGAATTTCACGGTGAGAAGAAACAATTTGCTCCCGAAGAAATTTCGTCTATGGTGTT 195657 || |||| | ||||||| ||| || ||| || || || || ||||| | Sbjct 84694 AGTGGAATACAAGGGTGAGATGAAGACCTTCTTTCCAGAGGAGATCAGCTCCATGGTCCT 84753 Query 195658 GATTAAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAGTTGT 195717 | ||||||||||||| ||| || ||| | |||| | ||| | |||| ||| | Sbjct 84754 TACCAAGATGAAGGAGATTGCTGAGGCTTACCTGGGCCGCAAGGTGCAGAATGCTGTTAT 84813 Query 195718 GACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTAT 195777 || || || |||||||||| ||| || || || ||||| || || || |||| | || Sbjct 84814 CACAGTGCCAGCTTACTTCAATGACTCCCAGCGCCAGGCCACCAAAGATGCTGGCACCAT 84873 Query 195778 TGCGGGTCTAAACTGTCTTA-GAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATG 195836 | || || || ||| | | || ||||| || || || || ||||| || || |||| Sbjct 84874 CACTGGCCTTAA-TGTGATGCGCATCATCAACGAGCCCACGGCAGCTGCCATAGCGTATG 84932 Query 195837 GTCTGGACAAGAA------CAAGGACGAAGATAAAAATGTATTGATCTTTGATCTCGGTG 195890 | |||| ||||| | || | ||| || ||||| | || ||||| | || | Sbjct 84933 GCTTGGATAAGAAAGGTACCCGGGCTGGAGAGAAGAATGTGCTCATTTTTGACTTGGGAG 84992 Query 195891 GTGGTACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTA 195950 | || || |||||||| || | |||| ||||| | |||||| || ||||| ||| | | Sbjct 84993 GGGGCACTTTTGATGTGTCCATCCTCACCATTGAGGATGGTATCTTTGAAGTGAAGTCCA 85052 Query 195951 CTGCTGGTGATACTCATCTAGGTGGTGAAGATTTCGATGCACGTCTTCTCCGTCA-TTTG 196009 | ||||||||||| ||||| ||||| || || || || || | | || |||| Sbjct 85053 CAGCTGGTGATACCCATCTGGGTGGGGAGGACTTTGACAACCGCATGGTGAACCACTTTG 85112 Query 196010 TCTGATGAGTTCCGTCGAAAGAATAAGAAAGATATTTCTGGAAATCCTAGGGCTCTTCGT 196069 | || |||||| || ||| | ||| || ||| | || ||| | || | | Sbjct 85113 TA-GAAGAGTTCAAACGTAAGCACAAGCGTGACATTGCGGGCAATAAGCGAGCAGTGAGA 85171 Query 196070 CGGCTTAGGACTGCATGTGAACGTGCCAAACGAACTCTCTCTTCTACGGCTCAAACAATG 196129 ||||| | || || || || | || || || || ||| || | | ||| | | Sbjct 85172 CGGCTGCGCACCGCTTGCGAGAGAGCTAAGCGCACCCTCAGCTCCTCCACCCAAGCTAGC 85231 Query 196130 GTTGAGATTGATTCGTTGTTTGACGGAATTGACTTCTATACAACTATTACCCGTGCACGT 196189 ||||||| || ||| ||| ||| || ||||||||||| || | ||||| ||||| || Sbjct 85232 ATTGAGATCGACTCGCTGTATGAGGGCATTGACTTCTACACCTCCATTACTCGTGCCCGC 85291 Query 196190 TTTGAAGAGTTAAACTCTGATTTGTT---TAGGAAGTGTATGGAACCTGTTGAACAAGTA 196246 ||||| ||| | ||| ||||| | || | | | || | || || || || | | Sbjct 85292 TTTGAGGAGCTCAACGCTGATCTCTTCCGTGGCACGT---TAGAGCCAGTGGAGAAGGCC 85348 Query 196247 CTTCGTGACGCAAAGATGGATAAGTCTAAGGTTGATGAAATTGTCCTTGTGGGAGGATCA 196306 || ||||| || || | || ||| | | | || || || || ||||| || || Sbjct 85349 CTGCGTGATGCCAAACTAGACAAGGGCCAAATCCAGGAGATAGTGCTGGTGGGCGGCTCC 85408 Query 196307 ACCCGTATTCCGAAGATTCAACAGATGCTTTCTAGCTTCTTCAATAATAAAGATTTAAAC 196366 || ||||| || ||||| || || |||| |||||||||| ||||| | ||| Sbjct 85409 ACTCGTATACCCAAGATCCAGAAGCTGCTACAGGACTTCTTCAATGGCAAAGAGCTCAAC 85468 Query 196367 AAAACGATCAACCCGGATGAAGCAGTTGCTTATGGTGCGGCCGTTCAGGCTGCTATTCTC 196426 |||| ||||| || ||||| || |||||||||||||| ||||| || || || || | Sbjct 85469 AAAAGCATCAATCCAGATGAGGCCGTTGCTTATGGTGCTGCCGTGCAAGCAGCGAT--CC 85526 Query 196427 TCAGGTGTTGACAA---TAATAACGTCCAAGATCTTCTGCTACTTGATGTTGCACCCGTA 196483 ||| | | |||||| | | ||||| || ||||| || | | ||||| | || | Sbjct 85527 TCATG-GGTGACAAGTCTGAGAACGTGCAGGATCTGCTCTTGTTGGATGTCACCCCTCTG 85585 Query 196484 TCCCTGGGTCTTGAAACAGCGGGTGGTGTTATGACTAAAATTATTGATAGGAACACAACT 196543 |||||||| | || || || || || || ||||| | || | | ||||| || Sbjct 85586 TCCCTGGGCATCGAGACTGCCGGAGGAGTAATGACCGCTCTCATCAAGCGTAACACCACC 85645 Query 196544 ATTCCGACTAAGAAGGAACAAGTCTTTTCAACGTATTCCGATAATCA-ACCAGGTGTTCA 196602 ||||| || ||| | || ||| | || || || || || || | || |||| | Sbjct 85646 ATTCCCACCAAGCAAACCCAGACCTTCACCACCTACTCAGACAACCAGAGCA-GTGTCCT 85704 Query 196603 TATTCAAGTATATGAAGGAGAACGCTCCCGTGCAAAGGATAACCATCTACTTGGAACTTT 196662 | | || || ||||| || || | || ||||||| ||| | | || || | || Sbjct 85705 TGTGCAGGTGTATGAGGGCGAGAGGGCCATGACAAAGGACAACAACTTGCTGGGCAAGTT 85764 Query 196663 CGATTTGACGGGGATTCCAGCTGCACCCAGAGGTGTTCCACAGATTAATGTTTGCTTCGA 196722 ||| | || ||||| || | || ||| | || || || ||||| | || || || Sbjct 85765 TGATCTAACAGGGATCCCCCCAGCGCCCCGTGGCGTCCCCCAGATCGAGGTGACGTTTGA 85824 Query 196723 TATAGACGCAAATGGAATTCTAAACGTCACAGCTGAGGACAAGGCTTCTGGCAAATCTGA 196782 ||||| || ||||| || || || |||| |||| ||||||| | || || | Sbjct 85825 CATAGATGCCAATGGTATCCTGAATGTCAGTGCTGTGGACAAGAGCACGGGGAAGGAGAA 85884 Query 196783 AAAGATTGTGATTACCAATGACAAGGGGCGGCTTTCTAAGGAGGAAATTGAACGTATGGT 196842 ||||| ||| ||||| ||||||||||| || ||||| || || || || ||||| Sbjct 85885 CAAGATCACGATCACCAACGACAAGGGGCGCCTCAGCAAGGATGATATCGACCGCATGGT 85944 Query 196843 TCAAGATGCGGAAAAGTACAGGGAAGAAGACGA 196875 || || || || || |||| | || ||||| Sbjct 85945 GCAGGAAGCAGAGAAATACAAAGCTGAGGACGA 85977 >seq5912 Length=13300 Score = 190 bits (210), Expect = 3e-43 Identities = 179/228 (79%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| ||||||||||| ||||| || || ||||| |||||||| || |||||| | Sbjct 8885 ATGCAGATCTTTGTGAAGACCCTGACAGGGAAAACCATCACCCTGGAAGTTGAGCCCAGT 8826 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||||| || || ||| | || |||||||| ||||||||||||||||| || || |||||| Sbjct 8825 GACACCATTGAGAACGTGAAGGCCAAGATCCAAGATAAGGAAGGCATCCCCCCAGATCAG 8766 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 || | || || |||||||| || ||||| || |||||||| ||||| |||| |||||| Sbjct 8765 CAGAGGCTGATCTTTGCTGGCAAGCAGCTGGAGGATGGACGCACCCTGTCTGACTACAAC 8706 Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGGT 172089 | || |||||||| || || ||||| || || | || |||||||| Sbjct 8705 ATCCAGAAGGAGTCCACCCTGCACCTGGTGCTGCGCCTGAGGGGTGGT 8658 Score = 176 bits (194), Expect = 6e-39 Identities = 175/227 (77%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| ||||||||||| ||||| || || ||||| |||||||| || |||||| | Sbjct 9113 ATGCAGATCTTTGTGAAGACCCTGACAGGGAAAACCATCACCCTGGAAGTTGAGCCCAGT 9054 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||||| || || ||| | || ||||||||||| |||||||||||||| || || |||||| Sbjct 9053 GACACCATTGAGAACGTGAAGGCCAAGATTCAGGATAAGGAAGGCATCCCCCCAGATCAG 8994 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 || | || || || ||||| || ||||| || |||||||| ||||| | || ||||| Sbjct 8993 CAGAGGCTGATCTTCGCTGGCAAGCAGCTGGAGGATGGACGCACCCTGTCCGACTACAAT 8934 Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGG 172088 | || |||||||| || || ||||| || || | || ||||||| Sbjct 8933 ATCCAGAAGGAGTCCACCCTGCACCTGGTGCTGCGCCTGAGGGGTGG 8887 Score = 161 bits (178), Expect = 1e-34 Identities = 172/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| || |||||||| || | || || || || |||||| | ||||||||| | Sbjct 9341 ATGCAGATTTTTGTGAAGACTTTGACAGGGAAGACCATCACCTTGGAGGTTGAGCCTAGT 9282 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||||| || || || |||| |||||||| || ||||||||||| || || || |||||| Sbjct 9281 GACACCATTGAGAATGTCAAGGCCAAGATCCAGGATAAGGAAGGTATCCCCCCAGATCAG 9222 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 || | || || |||||||| || ||||| ||||||||||| ||||| | || |||||| Sbjct 9221 CAGAGGCTGATCTTTGCTGGCAAGCAGCTGGAAGATGGACGCACCCTGTCCGACTACAAC 9162 Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGG 172088 | || |||||||| || || ||||| || || | || ||||||| Sbjct 9161 ATCCAGAAGGAGTCCACCCTGCACCTGGTGCTGCGCCTGAGGGGTGG 9115 >seq11249 Length=37093 Score = 181 bits (200), Expect = 1e-40 Identities = 358/530 (68%), Gaps = 0/530 (0%) Strand=Plus/Minus Query 195875 ATCTTTGATCTCGGTGGTGGTACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATA 195934 |||||||| || || ||||| || || ||||| || || | | |||||||| ||| || Sbjct 18226 ATCTTTGACCTTGGAGGTGGCACCTTCGATGTGTCCATTTTGACTATTGAAGATGGCATC 18167 Query 195935 TTCGAAGTAAAGGCTACTGCTGGTGATACTCATCTAGGTGGTGAAGATTTCGATGCACGT 195994 || || || || | ||||| ||||||||||| || ||||| ||||| |||||| || Sbjct 18166 TTTGAGGTGAAATCCACTGCAGGTGATACTCACCTGGGTGGAGAAGACTTCGATAACCGC 18107 Query 195995 CTTCTCCGTCATTTGTCTGATGAGTTCCGTCGAAAGAATAAGAAAGATATTTCTGGAAAT 196054 | || || || | ||||||| || ||| | ||||||||||| | || Sbjct 18106 ATGGTCAACCACTTCATCGCTGAGTTCAAGCGCAAGCACAAGAAAGATATCAGCGAGAAC 18047 Query 196055 CCTAGGGCTCTTCGTCGGCTTAGGACTGCATGTGAACGTGCCAAACGAACTCTCTCTTCT 196114 || || ||||||| || | || || || || ||||| || || || ||||| || Sbjct 18046 AAGAGAGCAGTTCGTCGCCTCCGCACGGCGTGCGAGCGTGCAAAGCGTACCCTCTCCTCC 17987 Query 196115 ACGGCTCAAACAATGGTTGAGATTGATTCGTTGTTTGACGGAATTGACTTCTATACAACT 196174 | | || | | |||| || ||||| | | ||| || ||||||||||| || | Sbjct 17986 AGCACGCAGGCCAGTATTGAAATCGATTCTCTCTATGAGGGTATTGACTTCTACACGTCC 17927 Query 196175 ATTACCCGTGCACGTTTTGAAGAGTTAAACTCTGATTTGTTTAGGAAGTGTATGGAACCT 196234 |||||| | || || ||||||||| | || |||| |||| | |||| || Sbjct 17926 ATTACCAGAGCTCGCTTTGAAGAGCTGAATGCTGACCTGTTCCGTGGCACCCTGGATCCC 17867 Query 196235 GTTGAACAAGTACTTCGTGACGCAAAGATGGATAAGTCTAAGGTTGATGAAATTGTCCTT 196294 || ||| | | || || || || ||| | || || || || | |||| || || | Sbjct 17866 GTGGAAAAGGCCCTGCGGGATGCCAAGTTAGACAAATCACAGATCCATGACATCGTGTTG 17807 Query 196295 GTGGGAGGATCAACCCGTATTCCGAAGATTCAACAGATGCTTTCTAGCTTCTTCAATAAT 196354 || || || || || ||||| || |||||||| | |||| ||||||||| Sbjct 17806 GTTGGTGGCTCTACTCGTATCCCAAAGATTCAGAAACTGCTGCAGGATTTCTTCAATGGC 17747 Query 196355 AAAGATTTAAACAAAACGATCAACCCGGATGAAGCAGTTGCTTATGGTGC 196404 ||||| || ||||| | ||||| || ||||||||||| ||||| ||||| Sbjct 17746 AAAGAGTTGAACAAGAGCATCAATCCTGATGAAGCAGTGGCTTACGGTGC 17697 Score = 116 bits (128), Expect = 5e-21 Identities = 117/152 (77%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 195698 ACTGTGAAAGATGCAGTTGTGACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCG 195757 ||||| | | |||| || || |||||||| || || |||| || || || || ||||| Sbjct 18497 ACTGTTACAAATGCGGTGGTCACTGTACCGGCCTATTTCAACGACTCTCAGCGCCAGGCT 18438 Query 195758 ACAAAGGACGCTGCTGCTATTGCGGGTCTAAACTGTCTTAGAATTATCAATGAACCAACA 195817 |||||||| |||| | ||||| || || ||| || |||| |||||||| ||||| Sbjct 18437 ACAAAGGATGCTGGAACCATTGCAGGGCTCAACGTGCTCCGAATCATCAATGAGCCAACT 18378 Query 195818 GCGGCTGCAATTGCTTATGGTCTGGACAAGAA 195849 || ||||| ||||| ||||||||||||||||| Sbjct 18377 GCTGCTGCTATTGCATATGGTCTGGACAAGAA 18346 >seq8606 Length=302679 Score = 170 bits (188), Expect = 3e-37 Identities = 174/227 (77%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| ||||||||||| ||||| ||||| || || |||||||| |||||||| | Sbjct 263632 ATGCAGATCTTTGTGAAGACCCTGACTGGCAAGACCATCACCCTGGAGGTTGAACCCAGT 263691 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||||| || || || | || |||||||| || || ||||| ||||| || || |||||| Sbjct 263692 GACACCATTGAGAATGTGAAGGCCAAGATCCAGGACAAGGAGGGCATCCCCCCGGATCAG 263751 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 || | || || |||||||| || ||||| ||||||||||| ||||| |||| |||||| Sbjct 263752 CAGAGGCTGATCTTTGCTGGCAAGCAGCTGGAAGATGGACGCACCCTGTCTGACTACAAC 263811 Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGG 172088 | || ||||| || || || ||||| || || | || ||||||| Sbjct 263812 ATCCAGAAGGAATCCACCCTGCACCTCGTGCTGCGCCTGAGGGGTGG 263858 Score = 161 bits (178), Expect = 1e-34 Identities = 163/212 (77%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| ||||||||||| ||||| ||||| || || |||||||| |||||||| | Sbjct 263404 ATGCAGATCTTTGTGAAGACCCTGACTGGCAAGACCATCACCCTGGAGGTTGAACCCAGT 263463 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||||| || || || | || |||||||| || || ||||| ||||| || || |||||| Sbjct 263464 GACACCATTGAGAATGTGAAGGCCAAGATCCAGGACAAGGAGGGCATCCCCCCGGATCAG 263523 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 || | || || |||||||| || ||||| ||||||||||| ||||| | || |||||| Sbjct 263524 CAGAGGCTGATCTTTGCTGGCAAGCAGCTGGAAGATGGACGCACCCTGTCCGACTACAAC 263583 Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCT 172073 | || ||||| || || || ||||| || || Sbjct 263584 ATCCAGAAGGAATCCACCCTGCACCTGGTGCT 263615 Score = 152 bits (168), Expect = 7e-32 Identities = 161/212 (76%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| ||||||||||| ||||| || || || || ||||| || ||||| ||| | Sbjct 263176 ATGCAGATCTTTGTGAAGACCCTGACCGGCAAGACCATCACTCTTGAGGTCGAGCCTAGC 263235 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||||| || || || | || |||||||| || || ||||||||||| || || |||||| Sbjct 263236 GACACTATTGAAAATGTGAAGGCCAAGATCCAGGACAAGGAAGGCATCCCCCCGGATCAG 263295 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 || | || || |||||||| || ||||| ||||| ||||| ||||| | || |||||| Sbjct 263296 CAGAGGCTGATCTTTGCTGGCAAGCAGCTGGAAGACGGACGCACCCTGTCCGACTACAAC 263355 Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCT 172073 | || ||||| || || || ||||| || || Sbjct 263356 ATCCAGAAGGAATCCACCCTGCACCTGGTGCT 263387 >seq5934 Length=225121 Score = 96.9 bits (106), Expect = 5e-15 Identities = 155/223 (70%), Gaps = 0/223 (0%) Strand=Plus/Plus Query 196637 AAGGATAACCATCTACTTGGAACTTTCGATTTGACGGGGATTCCAGCTGCACCCAGAGGT 196696 || ||||||||||| || |||||||| || ||||||| || || |||| || | ||| Sbjct 131195 AAAGATAACCATCTTCTGGGAACTTTTGACCTGACGGGAATCCCTCCTGCTCCTCGTGGT 131254 Query 196697 GTTCCACAGATTAATGTTTGCTTCGATATAGACGCAAATGGAATTCTAAACGTCACAGCT 196756 || ||||||||| | ||| ||| || ||||| | || || || || ||||| ||| Sbjct 131255 GTCCCACAGATTGAGGTTACCTTTGAGATAGATGTGAACGGGATCCTCCGAGTCACGGCT 131314 Query 196757 GAGGACAAGGCTTCTGGCAAATCTGAAAAGATTGTGATTACCAATGACAAGGGGCGGCTT 196816 || ||||||| |||| || | ||||| ||||| ||||| || ||||| Sbjct 131315 GAAGACAAGGGCACTGGGAACAAAAACAAGATCACAATTACAAATGATCAGAATCGGCTG 131374 Query 196817 TCTAAGGAGGAAATTGAACGTATGGTTCAAGATGCGGAAAAGT 196859 | || || ||||| | |||||| | ||||| || |||| Sbjct 131375 ACACCAGAAGAGATTGAGAGAATGGTTAATGATGCTGAGAAGT 131417 Score = 87.8 bits (96), Expect = 2e-12 Identities = 124/174 (71%), Gaps = 3/174 (2%) Strand=Plus/Plus Query 195814 AACAGCGGCTGCAATTGCTTATGGTCTGGACAAGAACAAGGACGAAGATAAAAATGTATT 195873 |||||| ||||| ||||||||||| |||||||| | || | || || || | | Sbjct 129578 AACAGCTGCTGCCATTGCTTATGGATTGGACAAG---AGAGAGGGTGAGAAGAACATCCT 129634 Query 195874 GATCTTTGATCTCGGTGGTGGTACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTAT 195933 | ||||| | || ||||| || || |||||||| || |||| ||||| ||| | Sbjct 129635 CGTATTTGACTTGGGCGGTGGGACTTTCGATGTCTCCCTCCTCACAATTGACAATGGAGT 129694 Query 195934 ATTCGAAGTAAAGGCTACTGCTGGTGATACTCATCTAGGTGGTGAAGATTTCGA 195987 |||||||| ||||||| ||| || ||||| || ||||| ||||| || || Sbjct 129695 CTTCGAAGTTGTGGCTACTAATGGAGACACTCACCTGGGTGGAGAAGACTTTGA 129748 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 657183864274080