Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tinamus_20guttatus_20[refseq_20GCF_5F000705375.1_202014-08-05] 82,514 sequences; 1,047,056,493 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq5912 89.7 1e-12 >seq5912 Length=13300 Score = 89.7 bits (98), Expect = 1e-12 Identities = 151/218 (69%), Gaps = 3/218 (1%) Strand=Plus/Minus Query 206161 GCTAAAATGTACCAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTG 206220 || |||||| ||||| ||| || || | ||||| || || ||||| ||||| || Sbjct 9347 GCAAAAATG---CAGATTTTTGTGAAGACTTTGACAGGGAAGACCATCACCTTGGAGGTT 9291 Query 206221 GAAAGTTCTGACACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTG 206280 || | |||||| | || || ||| ||||| || || || ||||| || Sbjct 9290 GAGCCTAGTGACACCATTGAGAATGTCAAGGCCAAGATCCAGGATAAGGAAGGTATCCCC 9231 Query 206281 CCGGACGCTCAAAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCC 206340 || || || || || ||||| || || |||||| ||||||||||| | || || || Sbjct 9230 CCAGATCAGCAGAGGCTGATCTTTGCTGGCAAGCAGCTGGAAGATGGACGCACCCTGTCC 9171 Query 206341 GATTACAACGTCCAGAAAGAGTCTACTCTTCACCTTGT 206378 || |||||| ||||||| ||||| || || ||||| || Sbjct 9170 GACTACAACATCCAGAAGGAGTCCACCCTGCACCTGGT 9133 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1180571366493394