Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tinamus_20guttatus_20[refseq_20GCF_5F000705375.1_202014-08-05] 82,514 sequences; 1,047,056,493 total letters Query= NC_030842.1 Length=115510 Score E Sequences producing significant alignments: (Bits) Value seq7236 114 1e-20 >seq7236 Length=503087 Score = 114 bits (126), Expect = 1e-20 Identities = 125/166 (75%), Gaps = 0/166 (0%) Strand=Plus/Minus Query 27207 TAGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGG 27266 ||| || ||||| || || |||||||| ||||| || || |||||||| || || ||||| Sbjct 201441 TAGGCCTGTGACATGGGCTATCATGTATGTGAGCAGTGAATAGCTGGCAATATTGAAGGG 201382 Query 27267 TACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTCCATCGCT 27326 || || || ||||| || || |||||||| ||||| || || || | || |||| Sbjct 201381 CACTCCCAGTCCCATATCTCCAGACCTCTGATAGAGTTGGCAGGACAATTCACCATTTAC 201322 Query 27327 TACGTAAAACTGACATATGGCGTGGCACGGAGGAAGAGCCATGAGG 27372 || ||||||||||| | || ||||| ||||| | |||||| ||| Sbjct 201321 AACATAAAACTGACAAAGAGCATGGCAAGGAGGCAAAGCCATCAGG 201276 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 369135609010334