Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Tympanuchus_20cupido_20pinnatus_20[genbank_20GCA_5F001870855.1_20201
6-11-07] 12,186 sequences; 983,776,544 total letters
Query= NC_002686.2
Length=124784
Score E
Sequences producing significant alignments: (Bits) Value
seq1 109 4e-19
>seq1
Length=54145758
Score = 109 bits (120), Expect = 4e-19
Identities = 126/170 (74%), Gaps = 0/170 (0%)
Strand=Plus/Plus
Query 20388 AGATGTGCCTTTAATGGCTTTGCCTCCATGTCATATGCTATGCCAATTTTACGTTGCTAA 20447
|||| | || | ||||| ||||| || || ||| || ||||| || || ||| ||
Sbjct 34290661 AGATATTTCTCTGATGGCCTTGCCACCTTGCCATGCTCTTTGCCAGTTCTATGTTCTAAA 34290720
Query 20448 TAATGAATTGTCGTGTCAAATGTATCAACGATCCGCTGATATGGGACTGGGTGTTCCTTT 20507
| ||| |||| |||||| ||||||| | || | ||||||||||| || || |||||
Sbjct 34290721 TGGCGAACTGTCTTGTCAACTGTATCAGAGGTCTGGAGATATGGGACTAGGAGTGCCTTT 34290780
Query 20508 CAATATTGCAAGTTATGCGCTGCTTACGTATATGATTGCACATGTTACAG 20557
||||||||| || ||| | ||||| || || ||||| || ||||| ||||
Sbjct 34290781 CAATATTGCCAGCTATTCACTGCTCACATACATGATAGCCCATGTCACAG 34290830
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 399124714439770
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |