Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Tympanuchus_20cupido_20pinnatus_20[genbank_20GCA_5F001870855.1_20201
6-11-07] 12,186 sequences; 983,776,544 total letters
Query= NC_003225.3
Length=309286
Score E
Sequences producing significant alignments: (Bits) Value
seq2 84.2 4e-11
>seq2
Length=38276455
Score = 84.2 bits (92), Expect = 4e-11
Identities = 90/119 (76%), Gaps = 0/119 (0%)
Strand=Plus/Minus
Query 101909 GAACTAATTGTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCC 101968
|||| | | || || ||||| ||||| ||||||||||||||| ||| | || |||||
Sbjct 2051007 GAACGAGTAGTAGCATTTGCAGCAGTGGAAGGAATCTTCTTTTCTGGCTCTTTTGCATCA 2050948
Query 101969 ATTTTCTGGATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCAT 102027
||||| ||| | ||||| || || | ||||||| ||||| | || |||||| ||||
Sbjct 2050947 ATTTTTTGGCTGAAGAAAAGAGGCTTAATGCCTGGACTCACTTTTTCTAATGAGCTCAT 2050889
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 989429493157630
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |