Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tympanuchus_20cupido_20pinnatus_20[genbank_20GCA_5F001870855.1_20201 6-11-07] 12,186 sequences; 983,776,544 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq2 84.2 4e-11 >seq2 Length=38276455 Score = 84.2 bits (92), Expect = 4e-11 Identities = 90/119 (76%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 101909 GAACTAATTGTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCC 101968 |||| | | || || ||||| ||||| ||||||||||||||| ||| | || ||||| Sbjct 2051007 GAACGAGTAGTAGCATTTGCAGCAGTGGAAGGAATCTTCTTTTCTGGCTCTTTTGCATCA 2050948 Query 101969 ATTTTCTGGATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCAT 102027 ||||| ||| | ||||| || || | ||||||| ||||| | || |||||| |||| Sbjct 2050947 ATTTTTTGGCTGAAGAAAAGAGGCTTAATGCCTGGACTCACTTTTTCTAATGAGCTCAT 2050889 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989429493157630