Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Tympanuchus_20cupido_20pinnatus_20[genbank_20GCA_5F001870855.1_20201
6-11-07] 12,186 sequences; 983,776,544 total letters
Query= NC_005832.1
Length=106332
Score E
Sequences producing significant alignments: (Bits) Value
seq1 122 6e-23
>seq1
Length=54145758
Score = 122 bits (134), Expect = 6e-23
Identities = 130/169 (77%), Gaps = 2/169 (1%)
Strand=Plus/Minus
Query 25773 CATGTCCGTGTACTCTGCTCCGAAATACCTCCACTGGAACCCGTACACCGGTCCTAGGTC 25832
|||||| |||| |||||||| || | |||||||||||| || || || ||||| | |||
Sbjct 34287165 CATGTCTTTGTATTCTGCTCCAAAGTGCCTCCACTGGAAACCATAAACTGGTCCCAAGTC 34287106
Query 25833 TCCATCTTCCCTGTGCTCAAAGCCCCT-CTTATCCAAAAAGTCTCTGGAACCATTGGCGT 25891
|| ||||| ||| | |||| ||||| |||||||| || || | || |||||||| |
Sbjct 34287105 CCCCTCTTCTCTG-GTGCAAAACCCCTGCTTATCCAGGAACTCACGTGATCCATTGGCAT 34287047
Query 25892 CCCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCC 25940
|||| ||||| || || || | ||||||||||||| ||||| || ||
Sbjct 34287046 CCCAAATCTTCACACCTTTTGCAGAGAGCTCTTTGGCATTTGTAGAACC 34286998
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 340087083826578
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |