Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Tympanuchus_20cupido_20pinnatus_20[genbank_20GCA_5F001870855.1_20201
6-11-07] 12,186 sequences; 983,776,544 total letters
Query= NC_020851.1
Length=208007
Score E
Sequences producing significant alignments: (Bits) Value
seq59 98.7 1e-15
>seq59
Length=4655252
Score = 98.7 bits (108), Expect = 1e-15
Identities = 77/92 (84%), Gaps = 0/92 (0%)
Strand=Plus/Minus
Query 48075 ACCATAAGGAGAACGTGGATAGAAAGGTGTGGTCTCTGTCTGTGGAGTCTCTTGCACCTT 48134
|||||||||||| | ||| || ||||| ||||||||| |||| || | |||||||| ||
Sbjct 1772580 ACCATAAGGAGATCTTGGGTAAAAAGGGGTGGTCTCTTTCTGCGGGATTTCTTGCACTTT 1772521
Query 48135 ACCATAAAGTTCACTGGTGGATGCTTGATAGA 48166
||| |||||||||||||||| ||||| ||||
Sbjct 1772520 TCCAAAAAGTTCACTGGTGGAGGCTTGGTAGA 1772489
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 665393028565520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |