Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Tympanuchus_20cupido_20pinnatus_20[genbank_20GCA_5F001870855.1_20201
6-11-07] 12,186 sequences; 983,776,544 total letters
Query= NC_021248.1
Length=307691
Score E
Sequences producing significant alignments: (Bits) Value
seq2 93.3 8e-14
>seq2
Length=38276455
Score = 93.3 bits (102), Expect = 8e-14
Identities = 90/116 (78%), Gaps = 0/116 (0%)
Strand=Plus/Plus
Query 49866 TCATTACTAAAAGTTAATCCTGGCATTAATCCTCTCTTTTTAAGCCAAAATATTGATGCA 49925
|||||| |||||| | ||| |||||||| ||||| || || |||||||| |||||||||
Sbjct 2050895 TCATTAGAAAAAGTGAGTCCAGGCATTAAGCCTCTTTTCTTCAGCCAAAAAATTGATGCA 2050954
Query 49926 AAACTACTAGAAAAGAATATACCCTCGACACACGCAAATGCTATTATTCTTGCTCC 49981
||| | ||||||||| || || || || |||||||||| || || | ||||
Sbjct 2050955 AAAGAGCCAGAAAAGAAGATTCCTTCCACTGCTGCAAATGCTACTACTCGTTCTCC 2051010
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 984326290061100
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |