Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Tympanuchus_20cupido_20pinnatus_20[genbank_20GCA_5F001870855.1_20201
6-11-07] 12,186 sequences; 983,776,544 total letters
Query= NC_028099.1
Length=122522
Score E
Sequences producing significant alignments: (Bits) Value
seq1 104 2e-17
>seq1
Length=54145758
Score = 104 bits (114), Expect = 2e-17
Identities = 121/162 (75%), Gaps = 6/162 (4%)
Strand=Plus/Minus
Query 111778 CCAGTGATGTGTGCAATCATGTATGTGAGTAGACTGTAACTAGCAATGTTAAATGGCACA 111837
|| |||| || || |||||||||||||| || || || ||||| || || |||||
Sbjct 34290831 CCTGTGACATGGGCTATCATGTATGTGAGCAGTGAATAGCTGGCAATATTGAAAGGCACT 34290772
Query 111838 CCTAGGCCCATATCTCCCGATCTTTGATATAGCTGACATGATAGTT---TATTTTGTGAC 111894
||||| ||||||||||| || || ||||| || ||||| || |||| |||| |
Sbjct 34290771 CCTAGTCCCATATCTCCAGACCTCTGATACAGTTGACAAGACAGTTCGCCATTTAG---A 34290715
Query 111895 ACATAAAATTGACAAAGTACATGACAAGGAGGCAATGCCATC 111936
||||| || || ||||| |||| ||||| ||||| ||||||
Sbjct 34290714 ACATAGAACTGGCAAAGAGCATGGCAAGGTGGCAAGGCCATC 34290673
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 391887389464318
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |