Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tympanuchus_20cupido_20pinnatus_20[genbank_20GCA_5F001870855.1_20201 6-11-07] 12,186 sequences; 983,776,544 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq84 84.2 2e-11 >seq84 Length=273125 Score = 84.2 bits (92), Expect = 2e-11 Identities = 78/99 (79%), Gaps = 0/99 (0%) Strand=Plus/Minus Query 19253 AGCTGTTTCCTAGTGGCTATGAAGGATGACAGCATTGAGGGCATCTACGAGACGCTCAAG 19312 || |||||||| || ||||||||||||||||||||||| |||||||| || || ||| Sbjct 179825 AGTTGTTTCCTGCTGTGCATGAAGGATGACAGCATTGAGGGAATCTACGACACCCTGAAG 179766 Query 19313 GAGTGCGCGCACATCTCCAAGTGGTCCGGGGGTATCGGG 19351 |||| || | |||||||||| | || || |||||| Sbjct 179765 CAGTGTGCCCTGATCTCCAAGTCTGCTGGTGGCATCGGG 179727 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548441245959840