Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tyto_20alba_20[refseq_20GCF_5F000687205.1_202014-05-08] 62,122 sequences; 1,120,143,088 total letters Query= NC_003529.1 Length=155060 Score E Sequences producing significant alignments: (Bits) Value seq52971 96.9 3e-15 >seq52971 Length=19208 Score = 96.9 bits (106), Expect = 3e-15 Identities = 102/132 (77%), Gaps = 2/132 (2%) Strand=Plus/Minus Query 153677 ATATTGTACTATTTCCGCACACAAATTGCTGCATTTTATCAGGCCGCAATTACTT-TGAT 153735 ||||| |||||||| | |||| |||||||||||| || | || ||| | || |||| Sbjct 10409 ATATTCCACTATTTCTGTGCACAGATTGCTGCATTTGATG-GTCCCCAAGTTCTGCTGAT 10351 Query 153736 TGCTTTTGCGGTTACAAGCGTCCTTGTATAGCATGTATGGTGTGCCGGTTTCGGCTTGAA 153795 |||| || ||||| |||| ||| ||||| |||||||| ||||||||||| || | ||| Sbjct 10350 TGCTCTTCCGGTTGCAAGAGTCTTTGTAGAGCATGTAGGGTGTGCCGGTCTCTGTCTGAG 10291 Query 153796 TTTCTATAATAG 153807 ||| || |||| Sbjct 10290 ATTCAATGATAG 10279 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 495678793902400