Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tyto_20alba_20[refseq_20GCF_5F000687205.1_202014-05-08] 62,122 sequences; 1,120,143,088 total letters Query= NC_004117.1 Length=158482 Score E Sequences producing significant alignments: (Bits) Value seq52971 96.9 4e-15 >seq52971 Length=19208 Score = 96.9 bits (106), Expect = 4e-15 Identities = 101/130 (78%), Gaps = 2/130 (2%) Strand=Plus/Minus Query 157099 ATATTGTACTATTTCCGCACACAAATTGCTGCATTTTATCAATCCGCAATTACTT-TGAT 157157 ||||| |||||||| | |||| |||||||||||| || ||| ||| | || |||| Sbjct 10409 ATATTCCACTATTTCTGTGCACAGATTGCTGCATTTGATGG-TCCCCAAGTTCTGCTGAT 10351 Query 157158 TGCTTTTGCGGTTGCAAGCGTCCTTGTATAACATGTACGGTGTGCCGGTTTCGGCTTGAA 157217 |||| || |||||||||| ||| ||||| | |||||| ||||||||||| || | ||| Sbjct 10350 TGCTCTTCCGGTTGCAAGAGTCTTTGTAGAGCATGTAGGGTGTGCCGGTCTCTGTCTGAG 10291 Query 157218 TTTCTATGAT 157227 ||| ||||| Sbjct 10290 ATTCAATGAT 10281 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 506620690643040