Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tyto_20alba_20[refseq_20GCF_5F000687205.1_202014-05-08] 62,122 sequences; 1,120,143,088 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq52971 105 1e-17 >seq52971 Length=19208 Score = 105 bits (116), Expect = 1e-17 Identities = 114/151 (75%), Gaps = 0/151 (0%) Strand=Plus/Minus Query 203910 CCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGTTGGGGTCGGCCATGT 203969 ||| || ||||||| | | ||||||| | ||||||| |||||| || || |||| Sbjct 16675 CCTGCTTCCACCCGAAGAAGTGCATGCTGGTGAGTTTGCCGTAGTTGGGTTCTGCAATGT 16616 Query 203970 GAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCCCGATCTGCGGCCATATTGATAA 204029 | ||||| ||||||||||| || || ||||||| | | ||||| ||||| || | || Sbjct 16615 GGATGTTGAGAGACTGGCTCTGATCAATGAAAGCTCCTCTGTCTGCTGCCATCTTCAGAA 16556 Query 204030 TGGTCTTCTGCGAAATCTCCCACACCGTCTT 204060 |||| || || || ||||||||||| ||||| Sbjct 16555 TGGTTTTTTGGGAGATCTCCCACACTGTCTT 16525 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 794537742108320