Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tyto_20alba_20[refseq_20GCF_5F000687205.1_202014-05-08] 62,122 sequences; 1,120,143,088 total letters Query= NC_023681.1 Length=152710 Score E Sequences producing significant alignments: (Bits) Value seq52971 93.3 4e-14 >seq52971 Length=19208 Score = 93.3 bits (102), Expect = 4e-14 Identities = 100/130 (77%), Gaps = 2/130 (2%) Strand=Plus/Minus Query 151327 ATATTGTACTATTTCCGCACACAAATTGCTGCATTTTATCAATCCGCAATTACTT-TGAT 151385 ||||| |||||||| | |||| |||||||||||| || ||| ||| | || |||| Sbjct 10409 ATATTCCACTATTTCTGTGCACAGATTGCTGCATTTGATGG-TCCCCAAGTTCTGCTGAT 10351 Query 151386 TGCTTTTGCGGTTGCAAGCGTCCTTGTATAACATGTACGGTGTGCCGGTTTCGGCTTGAA 151445 |||| || |||||||||| ||| ||||| | |||||| ||||||||||| || | ||| Sbjct 10350 TGCTCTTCCGGTTGCAAGAGTCTTTGTAGAGCATGTAGGGTGTGCCGGTCTCTGTCTGAG 10291 Query 151446 TTTCTATAAT 151455 ||| || || Sbjct 10290 ATTCAATGAT 10281 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 488164633370400