Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tyto_20alba_20[refseq_20GCF_5F000687205.1_202014-05-08] 62,122 sequences; 1,120,143,088 total letters Query= NC_024446.1 Length=306862 Score E Sequences producing significant alignments: (Bits) Value seq24976 109 1e-18 >seq24976 Length=44785 Score = 109 bits (120), Expect = 1e-18 Identities = 122/163 (75%), Gaps = 0/163 (0%) Strand=Plus/Plus Query 60149 GCATTATGGTGGTACTATATATCTAAAGGTATAGAATACTTAGATACGGTGTTTTTCATA 60208 || ||||||||||| ||| | |||||||| || || || || ||||| || || ||||| Sbjct 27772 GCTTTATGGTGGTATTATGTTTCTAAAGGAATTGAGTATTTGGATACAGTATTCTTCATC 27831 Query 60209 CTTAGGAAAAAGTTTAATCAGGTTAGTTTTTTACACGTATATCATCATTTTACTATGTTT 60268 || ||||| || ||||| || |||| || | || || ||||| ||||| || ||||| Sbjct 27832 CTGAGGAAGAAATTTAACCAAATTAGCTTCCTTCATGTCTATCACCATTTCACCATGTTC 27891 Query 60269 ACTTTAGGATGGGTAGGCATTAAATGGTTTGCCGGAGGTCAAG 60311 || || | ||| | || ||||| ||| |||| || || |||| Sbjct 27892 ACCTTGTGGTGGATTGGTATTAAGTGGGTTGCAGGTGGACAAG 27934 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 981045726299358