Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tyto_20alba_20[refseq_20GCF_5F000687205.1_202014-05-08] 62,122 sequences; 1,120,143,088 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq52130 91.5 3e-13 >seq52130 Length=109895 Score = 91.5 bits (100), Expect = 3e-13 Identities = 97/128 (76%), Gaps = 0/128 (0%) Strand=Plus/Minus Query 131858 AGACTTGTAGCTTTTGCTTGTGTTGAAGGTATATTCTTTTCAGGTGCTTTCTGTGCTATC 131917 ||| | || || |||||| |||||||| || |||||||| ||| | || |||||| Sbjct 100725 AGAGTGGTTGCCTTTGCTGCAGTTGAAGGCATCTTCTTTTCGGGTTCCTTTGCTGCTATA 100666 Query 131918 TTTTGGCTTAAGAAGCGTGGATTGATGCCTGGACTCTCATTGTCCAATCAATTCATCTCG 131977 |||||||| |||||| | ||| ||||||||||||| | || |||||| || | || Sbjct 100665 TTTTGGCTGAAGAAGAGGGGACTGATGCCTGGACTGACTTTCTCCAATGAACTTATTAGC 100606 Query 131978 AGAGATGA 131985 |||||||| Sbjct 100605 AGAGATGA 100598 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1185868170445242