Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tyto_20alba_20[refseq_20GCF_5F000687205.1_202014-05-08] 62,122 sequences; 1,120,143,088 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq52971 111 1e-19 >seq52971 Length=19208 Score = 111 bits (122), Expect = 1e-19 Identities = 99/124 (80%), Gaps = 0/124 (0%) Strand=Plus/Minus Query 147510 CACGATTTCGGCGCACAGGTTGCTGCATTTTATGACTCCCAAATTTTGCTGATTGCTTTT 147569 ||| ||||| | |||||| ||||||||||| ||| ||||| || ||||||||||| || Sbjct 10403 CACTATTTCTGTGCACAGATTGCTGCATTTGATGGTCCCCAAGTTCTGCTGATTGCTCTT 10344 Query 147570 CCGATTGCACGCGTCTTTGAAGAGCATGTACGGTCCGCCGGTCTCGACTTGCGTTTCAAC 147629 ||| ||||| | ||||||| |||||||||| ||| ||||||||| || | ||||| Sbjct 10343 CCGGTTGCAAGAGTCTTTGTAGAGCATGTAGGGTGTGCCGGTCTCTGTCTGAGATTCAAT 10284 Query 147630 GATA 147633 |||| Sbjct 10283 GATA 10280 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476241099487920