Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tyto_20alba_20[refseq_20GCF_5F000687205.1_202014-05-08] 62,122 sequences; 1,120,143,088 total letters Query= NC_027016.1 Length=226084 Score E Sequences producing significant alignments: (Bits) Value seq16104 98.7 1e-15 >seq16104 Length=9793 Score = 98.7 bits (108), Expect = 1e-15 Identities = 95/122 (78%), Gaps = 0/122 (0%) Strand=Plus/Minus Query 214100 GAGATGTTTGGACTCGTGCCCGGTTTCATGGTGTACGCCATTATCTGGCTGAGAGAGCAC 214159 ||| ||||||| | || || || || ||| ||||||| | || |||||||| || ||| Sbjct 6679 GAGGTGTTTGGTTTGGTCCCAGGCTTGATGATGTACGCTACAATATGGCTGAGGGAACAC 6620 Query 214160 AACAGGGTTTGCGACGTGCTGAAACAAGAGCACCCGGAATGGAACGACGAACAGCTGTTC 214219 ||| |||| || ||||| |||||||| ||||| || || ||| | || || ||||||||| Sbjct 6619 AACCGGGTCTGTGACGTCCTGAAACAGGAGCATCCAGAGTGGGATGATGAGCAGCTGTTC 6560 Query 214220 CA 214221 || Sbjct 6559 CA 6558 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 722779107785280