Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tyto_20alba_20[refseq_20GCF_5F000687205.1_202014-05-08] 62,122 sequences; 1,120,143,088 total letters Query= NC_028099.1 Length=122522 Score E Sequences producing significant alignments: (Bits) Value seq45405 111 1e-19 >seq45405 Length=77259 Score = 111 bits (122), Expect = 1e-19 Identities = 120/159 (75%), Gaps = 0/159 (0%) Strand=Plus/Minus Query 111778 CCAGTGATGTGTGCAATCATGTATGTGAGTAGACTGTAACTAGCAATGTTAAATGGCACA 111837 || |||| || ||||||||||||||||| || || || ||||| || || ||||| Sbjct 5401 CCTGTGACATGGGCAATCATGTATGTGAGCAGTGAATAGCTGGCAATATTGAAAGGCACT 5342 Query 111838 CCTAGGCCCATATCTCCCGATCTTTGATATAGCTGACATGATAGTTTATTTTGTGACACA 111897 ||||| ||||||||||| || || ||||| || || || || |||| | | | ||| Sbjct 5341 CCTAGTCCCATATCTCCAGACCTCTGATAGAGTTGGCAAGACAGTTCACCATTTAGAACA 5282 Query 111898 TAAAATTGACAAAGTACATGACAAGGAGGCAATGCCATC 111936 || ||||| ||||| |||| || |||||||| |||||| Sbjct 5281 TAGAATTGGCAAAGGGCATGGCATGGAGGCAAAGCCATC 5243 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 391648853331886