Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tyto_20alba_20[refseq_20GCF_5F000687205.1_202014-05-08] 62,122 sequences; 1,120,143,088 total letters Query= NC_029255.1 Length=129563 Score E Sequences producing significant alignments: (Bits) Value seq45405 96.9 3e-15 >seq45405 Length=77259 Score = 96.9 bits (106), Expect = 3e-15 Identities = 118/161 (73%), Gaps = 0/161 (0%) Strand=Plus/Minus Query 118534 AGCCCTGTCAGGTGAGCAATCATGTATGTCAACAAACTGTAGCTGGCTACATTAAAAGGA 118593 |||||||| | || |||||||||||||| | || |||||||| | ||| ||||| Sbjct 5404 AGCCCTGTGACATGGGCAATCATGTATGTGAGCAGTGAATAGCTGGCAATATTGAAAGGC 5345 Query 118594 ACACCCAGACCCATGTCTGCTGATCTCTGGTACAATTGGCAAGAGAGCTCCCCGTTTGCA 118653 || || || ||||| ||| | || ||||| || | ||||||||| || || || ||| | Sbjct 5344 ACTCCTAGTCCCATATCTCCAGACCTCTGATAGAGTTGGCAAGACAGTTCACCATTTAGA 5285 Query 118654 ACATAAAACTGACTTATGATGTGACATGGAGGCAGAACCAT 118694 ||||| || || | | | || |||||||||| | |||| Sbjct 5284 ACATAGAATTGGCAAAGGGCATGGCATGGAGGCAAAGCCAT 5244 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 414162994692808