Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Urile_20pelagicus_20[genbank_20GCA_5F002173435.1_202017-06-06] 20,951 sequences; 1,210,663,266 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq182 136 3e-27 >seq182 Length=5234274 Score = 136 bits (150), Expect = 3e-27 Identities = 131/168 (78%), Gaps = 0/168 (0%) Strand=Plus/Minus Query 20388 AGATGTGCCTTTAATGGCTTTGCCTCCATGTCATATGCTATGCCAATTTTACGTTGCTAA 20447 |||| | || | ||||||||||||||||| ||| || ||||| || || ||| || Sbjct 1130899 AGATATTTCTCTCATGGCTTTGCCTCCATGCCATGCTCTTTGCCAGTTCTATGTTCTAAA 1130840 Query 20448 TAATGAATTGTCGTGTCAAATGTATCAACGATCCGCTGATATGGGACTGGGTGTTCCTTT 20507 | |||||||||||| ||| | ||||| | || | |||||||||||||| || ||||| Sbjct 1130839 TGGTGAATTGTCGTGCCAACTCTATCAGAGGTCTGGAGATATGGGACTGGGAGTGCCTTT 1130780 Query 20508 CAATATTGCAAGTTATGCGCTGCTTACGTATATGATTGCACATGTTAC 20555 ||||||||| || ||| | |||||||| || |||||||| ||||| || Sbjct 1130779 CAATATTGCCAGCTATTCACTGCTTACATACATGATTGCCCATGTCAC 1130732 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399082072232695