Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Urile_20pelagicus_20[genbank_20GCA_5F002173435.1_202017-06-06] 20,951 sequences; 1,210,663,266 total letters Query= NC_024303.1 Length=144898 Score E Sequences producing significant alignments: (Bits) Value seq89 98.7 9e-16 >seq89 Length=3357968 Score = 98.7 bits (108), Expect = 9e-16 Identities = 126/171 (74%), Gaps = 2/171 (1%) Strand=Plus/Minus Query 21125 AGCATTTGGGGGCCTAGCTGCGATGGCTTAGATTGCATTGTTAAGCGGTGTGAACTGCCA 21184 ||||| ||||| || | || |||||| ||||| | |||||| |||| | | | ||||| Sbjct 3150338 AGCATATGGGGACCAACATGTGATGGCCTAGATCGTATTGTTGAGCGTTTTAATATGCCA 3150279 Query 21185 GAGCTTCAAGTGGGCGACTGGCTCATATTTGAAAACATGGGCGCTTACAGCTTGGTCAGC 21244 ||| | ||||| || |||||| || | |||||||||||||| || || | || |||| Sbjct 3150278 GAGTTGCAAGTTGGTGACTGGATCCTGTTTGAAAACATGGGTGCCTATA-CTGTTGCAGC 3150220 Query 21245 -TCTTCAACCTTTAACGGCTTCCCAAAGCCAGAAAAGCACTATGTTATTTC 21294 |||| ||||| || || |||| | |||| || |||||||| || || Sbjct 3150219 AGCTTCTACCTTCAATGGATTCCAGAGGCCAACAATACACTATGTGATGTC 3150169 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 463424203201680