Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Urile_20pelagicus_20[genbank_20GCA_5F002173435.1_202017-06-06] 20,951 sequences; 1,210,663,266 total letters Query= NC_026141.2 Length=4988 Score E Sequences producing significant alignments: (Bits) Value seq101 123 8e-25 seq593 114 4e-22 seq345 113 1e-21 seq80 113 1e-21 seq45 104 7e-19 seq1769 98.7 3e-17 seq600 98.7 3e-17 seq367 98.7 3e-17 seq1974 95.1 4e-16 >seq101 Length=712736 Score = 123 bits (136), Expect = 8e-25 Identities = 71/73 (97%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 2768 GGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAAC 2827 |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 13989 GGCTGAAGTAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCAAA 14048 Query 2828 CCCGGGCTTCAGC 2840 ||||||||||||| Sbjct 14049 CCCGGGCTTCAGC 14061 Score = 123 bits (136), Expect = 8e-25 Identities = 71/73 (97%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 2768 GGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAAC 2827 |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 26326 GGCTGAAGTAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCAAA 26267 Query 2828 CCCGGGCTTCAGC 2840 ||||||||||||| Sbjct 26266 CCCGGGCTTCAGC 26254 >seq593 Length=4808740 Score = 114 bits (126), Expect = 4e-22 Identities = 69/73 (95%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 2768 GGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAAC 2827 ||||| |||||||||| ||||||||| |||||||||||||||||||||||||||||||| Sbjct 3836712 GGCTGGAGTAGCTCAGCTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCAAT 3836771 Query 2828 CCCGGGCTTCAGC 2840 ||||||||||||| Sbjct 3836772 CCCGGGCTTCAGC 3836784 >seq345 Length=987852 Score = 113 bits (124), Expect = 1e-21 Identities = 68/72 (94%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 |||| |||||||||| ||||||||| |||||||||||||||||||||||||||||||| | Sbjct 919717 GCTGGAGTAGCTCAGCTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCAATC 919776 Query 2829 CCGGGCTTCAGC 2840 |||||||||||| Sbjct 919777 CCGGGCTTCAGC 919788 Score = 113 bits (124), Expect = 1e-21 Identities = 68/72 (94%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 |||| |||||||||| ||||||||| |||||||||||||||||||||||||||||||| | Sbjct 925216 GCTGGAGTAGCTCAGCTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCAATC 925275 Query 2829 CCGGGCTTCAGC 2840 |||||||||||| Sbjct 925276 CCGGGCTTCAGC 925287 >seq80 Length=7205798 Score = 113 bits (124), Expect = 1e-21 Identities = 71/77 (92%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 2764 TTATGGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTT 2823 ||| ||||| |||||||||| ||||||||| ||||||||||||||||||||||||||||| Sbjct 2102991 TTAGGGCTGGAGTAGCTCAGCTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTT 2103050 Query 2824 CAACCCCGGGCTTCAGC 2840 ||| ||| ||||||||| Sbjct 2103051 CAATCCCAGGCTTCAGC 2103067 >seq45 Length=534704 Score = 104 bits (114), Expect = 7e-19 Identities = 66/72 (92%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 |||| |||||||||| |||||||| |||||||||||||||||||||||||||||||| | Sbjct 480318 GCTGGAGTAGCTCAGCTGGGAGAGTGTTAGACTGAAGATCTAAAGGTCCCTGGTTCAATC 480259 Query 2829 CCGGGCTTCAGC 2840 || ||||||||| Sbjct 480258 CCAGGCTTCAGC 480247 >seq1769 Length=296722 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 40581 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 40522 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 40521 CCGGGTTTCGGC 40510 >seq600 Length=2500417 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 2333707 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 2333766 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 2333767 CCGGGTTTCGGC 2333778 >seq367 Length=3680317 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 241028 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 240969 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 240968 CCGGGTTTCGGC 240957 >seq1974 Length=46697 Score = 95.1 bits (104), Expect = 4e-16 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 8041 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 8100 Query 2829 CCGGGCTTCAGC 2840 | ||| ||| || Sbjct 8101 CTGGGTTTCGGC 8112 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15845968039395