Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Urile_20pelagicus_20[genbank_20GCA_5F002173435.1_202017-06-06] 20,951 sequences; 1,210,663,266 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq1287 221 4e-52 seq1980 172 2e-37 seq1104 140 1e-27 seq1769 134 4e-26 seq427 105 2e-17 seq24 89.7 2e-12 seq89 87.8 5e-12 >seq1287 Length=783258 Score = 221 bits (244), Expect = 4e-52 Identities = 802/1244 (64%), Gaps = 27/1244 (2%) Strand=Plus/Plus Query 349199 GCTATAGGAATCGATTTAGGTACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGATCGT 349258 || || || ||||| || || || || || || || || | ||| | || ||| Sbjct 255211 GCAATCGGCATCGACTTGGGCACCACGTACTCCTGCGTGGGTGTCTTTCAGCATGGCAAA 255270 Query 349259 GTAGAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTACC 349318 || || || || || ||||| || || ||| | || ||||| ||||| || || || Sbjct 255271 GTGGAGATCATCGCCAATGACCAGGGCAACCGCACCACGCCCAGCTACGTGGCCTTCACT 255330 Query 349319 GAAACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAAAT 349378 || || ||||| | || || ||| |||| || || || | ||| || || | || Sbjct 255331 GATACAGAGCGCCTCATCGGCGATGCTGCCAAGAACCAGGTGGCTATGAACCCTACCAAC 255390 Query 349379 ACGGTTTTTGATGCTAAGCGACTTATTGGTAGAAGTTTTTCTGACAAATCTACA---CAA 349435 || | |||||||| ||||| || ||||| | | | | |||| | ||| || Sbjct 255391 ACCATCTTTGATGCCAAGCGTCTCATTGGCCGCAAGTATGATGACC---CCACAGTGCAG 255447 Query 349436 TCTGATCTAAAACATTTTCCTTTTACTGTTGTTCCAAAAGACGGTGATAAACCAATTATT 349495 |||| | || || | || || ||| || || || |||| || || | | Sbjct 255448 GCTGACATGAAGCACTGGCCGTTCCGTGTGGTG---AACGAGGGTGGCAAGCCCAAGGTG 255504 Query 349496 GAGGTTGAATATAAAGGTGA-ACAAAAACAATTTTTACCCGAAGAAATTTCATCAATGGT 349554 | || || || || ||||| | || || || || || || || || || ||||| Sbjct 255505 CAAGTGGAGTACAAGGGTGAGATGAAGACC-TTCTTCCCAGAGGAGATCAGCTCCATGGT 255563 Query 349555 TTTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCTGT 349614 | || |||||||| |||||||| || ||| | || | ||| ||||||| Sbjct 255564 CCTCACCAAGATGAAGGAGATTGCTGAGGCGTATCTGGGGCGCAAGGTACAGAATGCTGT 255623 Query 349615 TATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAG 349674 || || || || || || || ||||| ||||||| || || ||||||||||||| Sbjct 255624 CATCACAGTGCCTGCTTACTTCAATGACTCCCAGCGCCAGGCCACCAAAGATGCTGGCAC 255683 Query 349675 CATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATA 349734 |||| | || | ||||| | | || || ||||| ||||| || || || || || || Sbjct 255684 CATTACTGGCCTTAATGTGATGCGTATTATCAATGAGCCCACAGCAGCCGCGATAGCCTA 255743 Query 349735 TGGGCTTGATAAAATGAGT------GACCAAGaaaaaaaTATTCTTATTTTTGATTTAGG 349788 ||| || || || | || | | ||| || ||| | || || ||||| ||||| Sbjct 255744 TGGCCTGGACAAGAAAGGTACTCGGGCCGGAGAGAAGAATGTGCTCATCTTTGACTTAGG 255803 Query 349789 TGGTGGTACTTTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGC 349848 || || ||||||||||| || | || || |||| || || || ||||| || || | Sbjct 255804 AGGGGGCACTTTTGATGTGTCCATCCTTACCATTGAGGATGGCATCTTTGAGGTGAAGTC 255863 Query 349849 AACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCATTT 349908 || |||||||| || ||||| ||||| || || ||||| || || | || ||||| Sbjct 255864 CACAGCTGGTGACACCCATCTGGGTGGGGAGGACTTTGACAACCGCATGGTGAACCATTT 255923 Query 349909 TGTTAAAGAATTTAAGCGTCAAGC-TAAAATTGATATTGGAGATAATCCTAGAGCAATGC 349967 ||| ||||||| |||||| |||| || ||| |||| | || ||||| || Sbjct 255924 TGTGGAAGAATTCAAGCGT-AAGCACAAGCGTGACATTGCTGGCAACAAGCGAGCAGTGA 255982 Query 349968 GTCGCCTAAGAACTGCGTGTGAACGTGCTAAGCGTTCCTTATCATCTACTACCCAAACCT 350027 | || || | || || || || | || ||||| || | || | || || | Sbjct 255983 GGCGACTCCGTACAGCTTGCGAGAGGGCGAAGCGCACCCTGAGCTCCTCCACGCAGGCTA 256042 Query 350028 CTATTGAAATTGATTCTCTTGCTGATGGCAAAGATTTCTTTTCATCTATTACACGTGCTC 350087 ||||| ||||| || || || |||| || |||| | || ||||| ||||| | Sbjct 256043 GCATTGAGATTGACTCCCTGTACGAGGGCATTGACTTCTACACCTCCATTACTCGTGCCC 256102 Query 350088 GGTTTGAAGAATTATGTATGGATCTTTTTAGAGCAACAATGGATCCTGTGGAAAAAGTAT 350147 | ||||| || | | ||||| || | | || |||| || ||||| || | Sbjct 256103 GCTTTGAGGAGCTCAATGCTGATCTCTTCCGTGGCACCCTGGAGCCAGTGGAGAAGGCTC 256162 Query 350148 TAAAAGATGCAAAAATGTCCAAAAATCAGATTGATGAAGTAGTTTTAGTTGGTGGTTCTA 350207 | ||||| || | ||| ||||| | || | || | || ||||| |||| Sbjct 256163 TGCGTGATGCCAAGCTAGACAAGGGCCAGATCCAGGAGATCGTGCTGGTAGGTGGCTCTA 256222 Query 350208 CACGTATTCCAAAAGTTCAACAGTTACTATCTGAGTTTTTTAATGGCAAAGAAC-CTTCT 350266 | ||||| || || | ||| || | ||| || || || ||||||||||| | | | Sbjct 256223 CCCGTATCCCCAAGATCCAAAAGCTGCTACAGGACTTCTTCAATGGCAAAGAGCTCAACA 256282 Query 350267 AGATCAATTAATCCAGATGAAGCTGTTGCATATGGTGCTGCTGTTCAGGCATCTATTTTA 350326 ||| | || ||||| ||||| |||||||| || || |||||||| || ||| |||| | Sbjct 256283 AGAGC-ATCAATCCCGATGAGGCTGTTGCTTACGGCGCTGCTGTGCAAGCAGCTATCCTC 256341 Query 350327 TCTGGAAATAAGAGTTCTAAAATTG---ATGATCTATTACTACTAGATGTAACTCCACTT 350383 ||| | ||| ||| | | || | ||||| | || | ||||| || || || Sbjct 256342 ATGGGAGACAAG---TCTGAGAATGTGCAGGATCTGCTGCTGTTGGATGTCACCCCTCTG 256398 Query 350384 TCGCTTGGATTAGAAACTTCTGGTGAAGTAATGACTGTTCTTAT 350427 || || || | || || | |||| ||| ||||||| ||| || Sbjct 256399 TCCCTGGGCATCGAGACAGCCGGTGGAGTGATGACTGCTCTCAT 256442 >seq1980 Length=225955 Score = 172 bits (190), Expect = 2e-37 Identities = 366/539 (68%), Gaps = 8/539 (1%) Strand=Plus/Minus Query 349770 TTCTTATTTTTGATTTAGGTGGTGGTACTTTTGATGTATCACTACTAACACTTGAAGAGG 349829 ||||||| ||||| | || ||||| || |||||||| ||| | || || ||||||| | Sbjct 1240 TTCTTATCTTTGACCTTGGAGGTGGCACCTTTGATGTGTCAATTCTGACTATTGAAGATG 1181 Query 349830 GAATTTTTGAAGTTAAAGCAACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGATA 349889 | || ||||| || ||| | ||||| ||||| || || | ||||||||||| || || | Sbjct 1180 GCATCTTTGAGGTGAAATCCACTGCAGGTGACACTCACTTGGGTGGAGAAGACTTCGACA 1121 Query 349890 ATCGTCTCGTTTCGCATTTTGTTAAAGAATTTAAGCGTCAAGC-TAAAATTGATATTGGA 349948 | || | || || || | ||||| ||||| ||||| || | || || Sbjct 1120 ACCGCATGGTCAACCACTTCATCGCTGAATTCAAGCG-CAAGCACAAGAAAGACATCACT 1062 Query 349949 GATAATCCTAGAGCAATGCGTCGCCTAAGAACTGCGTGTGAACGTGCTAAGCGTTCCTTA 350008 || || |||||| | |||||||| | ||||| || || ||||| |||||| | | Sbjct 1061 GAGAACAAGAGAGCAGTCCGTCGCCTCCGCACTGCATGCGAGCGTGCAAAGCGTACTCTG 1002 Query 350009 TCATCTACTACCCAAACCTCTATTGAAATTGATTCTCTTGCTGATGGCAAAGATTTCTTT 350068 ||||||| || || || |||||||||||| ||||| ||| || | || |||| Sbjct 1001 TCATCTAGCACGCAGGCCAGTATTGAAATTGACTCTCTCTATGAGGGTATTGACTTCTAC 942 Query 350069 TCATCTATTACACGTGCTCGGTTTGAAGAATTATGTATG--GATCTTTTTAGAGCAACAA 350126 | || ||||| | ||||| |||||||| || | | || || || | | || Sbjct 941 ACGTCCATTACCAGAGCTCGCTTTGAAGA--GCTGAACGCCGACCTGTTCCGCGGCACCC 884 Query 350127 TGGATCCTGTGGAAAAAGTATTAAAAGATGCAAAAATGTCCAAAAATCAGATTGATGAAG 350186 |||||||||| ||||| | | ||||| || | |||| ||||| |||| Sbjct 883 TGGATCCTGTCGAAAAGGCCCTGCGGGATGCCAAGCTCGACAAATCGCAGATCCATGACA 824 Query 350187 TAGTTTTAGTTGGTGGTTCTACACGTATTCCAAAAGTTCAACAGTTACTATCTGAGTTTT 350246 | || | |||||||| || || ||||| ||||| |||| || | || || || | Sbjct 823 TTGTGCTGGTTGGTGGGTCGACTCGTATCCCAAAGATTCAGAAGCTGCTGCAGGACTTCT 764 Query 350247 TTAATGGCAAAGAAC-CTTCTAGATCAATTAATCCAGATGAAGCTGTTGCATATGGTGC 350304 | || |||||||| | | ||| | || || || ||||||||||| || |||||||| Sbjct 763 TCAACGGCAAAGAGCTGAACAAGAGC-ATCAACCCTGATGAAGCTGTGGCTTATGGTGC 706 Score = 109 bits (120), Expect = 2e-18 Identities = 346/531 (65%), Gaps = 4/531 (1%) Strand=Plus/Plus Query 183262 CTGCACCATATGCAACAGCTTCATCTGGGTTAATTGAACGAGATAAT-TCTTTGCCATTA 183320 |||||||||| || ||||||||||| ||||| || | | | | | |||||||| || Sbjct 704 CTGCACCATAAGCCACAGCTTCATCAGGGTTGAT-GCTCTTGTTCAGCTCTTTGCCGTTG 762 Query 183321 AAAAATTCTGAAAGCATTTGTTGAATTTTTGGAATTCTAGTTGAACCACCGACTAATACT 183380 || || || |||| | ||||| ||||| || | ||| || ||||| || | || Sbjct 763 AAGAAGTCCTGCAGCAGCTTCTGAATCTTTGGGATACGAGTCGACCCACCAACCAGCACA 822 Query 183381 ACTTCATCGATATTACTTTTA-CTAATTTGTGAATCTTTTAAAACTTTTTCAACAGGGTC 183439 | |||| ||| | ||| | | ||| | ||| | | ||||| ||||| || Sbjct 823 ATGTCATGGATCTGCGATTTGTCGAGCTTG-GCATCCCGCAGGGCCTTTTCGACAGGATC 881 Query 183440 CATAGTTTTTCTAAATAAATCTATACATAACTCTTCTAATCTTGCTCTAGTTAAAGATGa 183499 || || | || | || | |||||| || | ||||| || | || | Sbjct 882 CAGGGTGCCGCGGAACAGGTCGGCGTTCAGCTCTTCAAAGCGAGCTCTGGTAATGGACGT 941 Query 183500 aaaaaaGTCAATACCATTATATAAGGAATCAATTTCAATCGATGTTTGTGTAGATGATGA 183559 | ||||||||||| | ||| | || ||||||||||| | || || ||||| Sbjct 942 GTAGAAGTCAATACCCTCATAGAGAGAGTCAATTTCAATACTGGCCTGCGTGCTAGATGA 1001 Query 183560 TAATGTTCTTTTAGCTCGTTCACATGCTGTTCTTAGTCGACGTAATGATCTTGGATTATC 183619 | || | || || || || ||||| || | || ||||| | || ||| || || Sbjct 1002 CAGAGTACGCTTTGCACGCTCGCATGCAGTGCGGAGGCGACGGACTGCTCTCTTGTTCTC 1061 Query 183620 TGTAATATCTTGTTTATGTTTTCTTTTAAATTCAGTAATAAAATGTTGAAGTAATCTTGT 183679 || || |||| || || || | || ||||||| || || || | | | | | Sbjct 1062 AGTGATGTCTTTCTTGTGCTTGCGCTTGAATTCAGCGATGAAGTGGTTGACCATGCGGTT 1121 Query 183680 ATCAAAATCTTCACCACCTAAATGTGTATCGCCAGCAGTAGCTTTAACTTCAAATATTCC 183739 || || ||||| ||||| || || || || || ||||| | ||| || ||||| || || Sbjct 1122 GTCGAAGTCTTCTCCACCCAAGTGAGTGTCACCTGCAGTGGATTTCACCTCAAAGATGCC 1181 Query 183740 GTCTTCAATATTTAAAATTGATACATCAAATGTACCACCACCCAAATCAAA 183790 ||||||||| | | |||||| |||||||| || ||||| || | ||||| Sbjct 1182 ATCTTCAATAGTCAGAATTGACACATCAAAGGTGCCACCTCCAAGGTCAAA 1232 Score = 102 bits (112), Expect = 2e-16 Identities = 113/151 (75%), Gaps = 0/151 (0%) Strand=Plus/Minus Query 349598 ACAGTAACTGATGCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCA 349657 || || ||| ||||||| | ||||||||||| ||||| ||||| | |||||| || Sbjct 1514 ACTGTTACTAATGCTGTCGTGACTGTACCAGCTTATTTCAATGACTCTCAGCGTCAGGCT 1455 Query 349658 ACAAAAGATGCTGGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACT 349717 || ||||||||||| | |||||| ||| | || || || |||| || || || || || Sbjct 1454 ACGAAAGATGCTGGAACCATTGCAGGGCTCAACGTGCTGCGAATTATCAACGAGCCGACA 1395 Query 349718 GCTGCAGCAATTGCATATGGGCTTGATAAAA 349748 ||||| || || || ||||| || || |||| Sbjct 1394 GCTGCTGCCATAGCCTATGGTCTGGACAAAA 1364 Score = 84.2 bits (92), Expect = 7e-11 Identities = 146/208 (70%), Gaps = 7/208 (3%) Strand=Plus/Minus Query 349383 TTTTT--GATGCTAAGCGACTTATTGGTAGAAGTTTTTCTGACAAATCTACACAATCTGA 349440 ||||| ||||| ||||| | ||||| | || ||| ||| | | || ||||| Sbjct 1824 TTTTTCAGATGCAAAGCGGTTGATTGGGCGTAGATTTGATGATTCAGTTGTCCAGTCTGA 1765 Query 349441 TCTAAAACATTTTCCTTTTACTGTTGTTCCAAAAGACGGTGATAAACCAATTATTGAGGT 349500 | | || || | || || ||||| || || || | || | ||||| | |||| Sbjct 1764 TATGAAGCACTGGCCGTTCACTGTGGTG---AACGATGCTGGCAGACCAAAAGTCCAGGT 1708 Query 349501 TGAATATAAAGGTGAACAAAAACAATTTTTACCC-GAAGAAATTTCATCAATGGTTTTAG 349559 || || ||||| || | ||| | ||| ||||| ||||||||||| || ||||||||| Sbjct 1707 GGAGTACAAAGGCGAG-ACAAAGAGTTTCTACCCAGAAGAAATTTCTTCCATGGTTTTAA 1649 Query 349560 TTAAAATGAAGGAAATTGCTGAAGCATA 349587 ||||||||||||||||| |||||||| Sbjct 1648 CCAAAATGAAGGAAATTGCAGAAGCATA 1621 >seq1104 Length=759006 Score = 140 bits (154), Expect = 1e-27 Identities = 158/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 140526 AGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCT 140585 ||||||||||| |||||||| || || || || || || || || | || || |||||| Sbjct 139125 AGAACAAGATGGAGAGTAGATTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATCT 139184 Query 140586 TCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCC 140645 || || || || ||||| ||||| || | |||||||| || ||||| ||||| || ||| Sbjct 139185 TCCAGCTGCTTGCCAGCGAAGATCAGCCTCTGCTGATCGGGGGGAATGCCTTCCTTGTCC 139244 Query 140646 TGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTC 140705 || || || || || ||||| ||||| | ||| || || || || || || | ||| Sbjct 139245 TGGATCTTTGCCTTCACATTCTCAATGGTGTCACTGGGCTCGACCTCGAGGGTGATGGTC 139304 Query 140706 TTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || ||||| || || || ||||| |||||||| Sbjct 139305 TTGCCGGTCAGGGTCTTCACAAAGATCTGCAT 139336 >seq1769 Length=296722 Score = 134 bits (148), Expect = 4e-26 Identities = 157/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 140526 AGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCT 140585 || || ||||| || || ||||| ||||| || || || || || | || ||||||||| Sbjct 35392 AGCACCAGATGCAGGGTGGACTCCTTTTGGATGTTGTAGTCGGAAAGGGTGCGCCCATCT 35451 Query 140586 TCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCC 140645 || || || || ||||||||||| | | ||||||||||| ||||| || || || ||| Sbjct 35452 TCCAGCTGCTTGCCAGCAAAGATCAACCTCTGCTGATCAGGCGGAATGCCCTCCTTGTCC 35511 Query 140646 TGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTC 140705 || || || || || ||||| ||||| | ||| || ||||| || || || | ||| Sbjct 35512 TGGATCTTGGCCTTGACATTCTCAATGGTGTCACTGGGCTCAACCTCCAGGGTGATGGTC 35571 Query 140706 TTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || || || || || || ||||| |||||||| Sbjct 35572 TTGCCCGTCAGGGTCTTCACAAAGATCTGCAT 35603 Score = 134 bits (148), Expect = 4e-26 Identities = 156/209 (75%), Gaps = 1/209 (0%) Strand=Plus/Plus Query 140530 CAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCTTCAA 140589 |||| || ||||| ||||| || || || || || || || | || ||||| ||||| | Sbjct 35853 CAAG-TGCAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAAAGGGTGCGCCCGTCTTCCA 35911 Query 140590 GTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAA 140649 | || || ||||||||||| | | ||||||||||| ||||| ||||| || ||||| | Sbjct 35912 GCTGCTTGCCAGCAAAGATCAACCTCTGCTGATCAGGGGGAATGCCTTCCTTGTCCTGGA 35971 Query 140650 TTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTC 140709 | || || || ||||| ||||| | |||| || ||||| || || || | ||||| | Sbjct 35972 TCTTGGCCTTGACATTTTCAATGGTATCACTGGGCTCAACCTCCAGGGTGATGGTCTTGC 36031 Query 140710 CGGTTAGTGTTTTTACAAAAATCTGCATT 140738 | || || || || ||||| ||||||||| Sbjct 36032 CCGTCAGGGTCTTCACAAAGATCTGCATT 36060 Score = 131 bits (144), Expect = 5e-25 Identities = 156/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 140526 AGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCT 140585 || || ||||| || || ||||| || || || || || ||||| | || ||||| ||| Sbjct 35620 AGCACCAGATGCAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAAAGGGTGCGCCCGTCT 35679 Query 140586 TCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCC 140645 || || || || ||||||||||| | | ||||||||||| ||||| || || || ||| Sbjct 35680 TCCAGCTGCTTGCCAGCAAAGATCAACCTCTGCTGATCAGGCGGAATGCCCTCCTTGTCC 35739 Query 140646 TGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTC 140705 || || || || || ||||| ||||| | ||| || ||||| || || || | ||| Sbjct 35740 TGGATCTTGGCCTTGACATTCTCAATGGTGTCACTGGGCTCAACCTCCAGGGTGATGGTC 35799 Query 140706 TTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || || || || || || ||||| |||||||| Sbjct 35800 TTGCCCGTCAGGGTCTTCACAAAGATCTGCAT 35831 >seq427 Length=1578491 Score = 105 bits (116), Expect = 2e-17 Identities = 87/106 (82%), Gaps = 0/106 (0%) Strand=Plus/Plus Query 349608 ATGCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATG 349667 |||||||| ||||||| |||||||| ||||| ||||| |||||| || |||||||||| Sbjct 1127641 ATGCTGTTGTTACTGTGCCAGCCTACTTTAACGATGCTCAGCGTCAGGCTACAAAAGATG 1127700 Query 349668 CTGGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACC 349713 |||| | ||||| ||||| ||||| | ||||| |||||||| || Sbjct 1127701 CTGGGACAATTGCTGGGTTGAATGTGATGAGAATTATTAATGAGCC 1127746 Score = 86.0 bits (94), Expect = 2e-11 Identities = 123/173 (71%), Gaps = 3/173 (2%) Strand=Plus/Plus Query 349715 ACTGCTGCAGCAATTGCATATGGGCTTGATAAAATGAGTGACCAAGaaaaaaaTATTCTT 349774 || ||||| || ||||| ||||| | || || ||| || || || || || || Sbjct 1127831 ACGGCTGCTGCCATTGCTTATGGATTGGACAA---GAGAGAGGGTGAGAAGAACATCCTC 1127887 Query 349775 ATTTTTGATTTAGGTGGTGGTACTTTTGATGTATCACTACTAACACTTGAAGAGGGAATT 349834 | || || || |||||||| ||||||||||| || || || ||| |||| | ||| | Sbjct 1127888 GTGTTCGACTTGGGTGGTGGAACTTTTGATGTCTCCCTCCTCACAATTGACAATGGAGTC 1127947 Query 349835 TTTGAAGTTAAAGCAACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGA 349887 ||||||||| || ||| ||| || || || || ||||| ||||| ||||| Sbjct 1127948 TTTGAAGTTGTGGCTACTAATGGCGACACCCACCTGGGTGGGGAAGACTTTGA 1128000 >seq24 Length=4688945 Score = 89.7 bits (98), Expect = 2e-12 Identities = 73/89 (82%), Gaps = 0/89 (0%) Strand=Plus/Plus Query 140548 CTTTTTGAATATTATAATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGA 140607 ||||||||||||| || || || | ||| || |||||||| || || || |||||||| | Sbjct 2769194 CTTTTTGAATATTGTAGTCGGACAGTGTGCGTCCATCTTCTAGCTGCTTACCAGCAAAAA 2769253 Query 140608 TTAGACGTTGCTGATCAGGAGGAATTCCT 140636 | || || ||||||||||||||||| ||| Sbjct 2769254 TAAGTCGCTGCTGATCAGGAGGAATGCCT 2769282 >seq89 Length=3357968 Score = 87.8 bits (96), Expect = 5e-12 Identities = 98/129 (76%), Gaps = 4/129 (3%) Strand=Plus/Minus Query 223719 ATGCCTCATCTCT--TGATATTAATTCATTTGAAAATGTTAATCCAGGCATTAAACCTCT 223776 || |||||||||| ||||| | |||||| ||||| || | |||||||||||| ||||| Sbjct 2809620 ATACCTCATCTCTACTGATA--AGTTCATTAGAAAAAGTGAGTCCAGGCATTAATCCTCT 2809563 Query 223777 CTTTTTCATCCAAAATATTGCGCAAAAAGCTCCTGaaaaaaaTATACCTTCTACACAAGC 223836 || |||| |||||| |||| ||||| || ||||| || || ||||| || || Sbjct 2809562 TTTCTTCAGCCAAAAAATTGATGCAAAAGAGCCAGAAAAGAAAATTCCTTCCACTGCTGC 2809503 Query 223837 AAACGCTAC 223845 ||| ||||| Sbjct 2809502 AAAAGCTAC 2809494 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1514847653158653