Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Urile_20pelagicus_20[genbank_20GCA_5F002173435.1_202017-06-06] 20,951 sequences; 1,210,663,266 total letters Query= NC_028099.1 Length=122522 Score E Sequences producing significant alignments: (Bits) Value seq182 91.5 1e-13 >seq182 Length=5234274 Score = 91.5 bits (100), Expect = 1e-13 Identities = 115/158 (73%), Gaps = 0/158 (0%) Strand=Plus/Plus Query 111778 CCAGTGATGTGTGCAATCATGTATGTGAGTAGACTGTAACTAGCAATGTTAAATGGCACA 111837 || |||| || |||||||||||||| || || || || ||||| || || ||||| Sbjct 1130729 CCCGTGACATGGGCAATCATGTATGTAAGCAGTGAATAGCTGGCAATATTGAAAGGCACT 1130788 Query 111838 CCTAGGCCCATATCTCCCGATCTTTGATATAGCTGACATGATAGTTTATTTTGTGACACA 111897 || || ||||||||||| || || ||||| || || || || | || | | | ||| Sbjct 1130789 CCCAGTCCCATATCTCCAGACCTCTGATAGAGTTGGCACGACAATTCACCATTTAGAACA 1130848 Query 111898 TAAAATTGACAAAGTACATGACAAGGAGGCAATGCCAT 111935 || || || ||||| |||| || |||||||| ||||| Sbjct 1130849 TAGAACTGGCAAAGAGCATGGCATGGAGGCAAAGCCAT 1130886 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 391845520488013