Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zonotrichia_20albicollis_20[refseq_20GCF_5F000385455.1_202013-04-30] 6,018 sequences; 1,052,600,561 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq47 86.0 7e-12 >seq47 Length=4964275 Score = 86.0 bits (94), Expect = 7e-12 Identities = 80/102 (78%), Gaps = 0/102 (0%) Strand=Plus/Plus Query 93362 ATGTATGTATCGATTAACAGAGAATACATTTCAGAATGGACATTCTCCATTGCAATTTGG 93421 ||||| || || || | ||| |||||||| ||||| | || ||||| ||||| ||| Sbjct 875999 ATGTAGGTGTCAATGAGAAGACTGTACATTTCTGAATGTATGTTTTCCATGGCAATCTGG 876058 Query 93422 AATCCGTAGAAACATCTAGCTTCCGTGATCTGCACTTCTTGA 93463 || || |||||||| | |||||| ||||| |||||||||||| Sbjct 876059 AAGCCATAGAAACAGCGAGCTTCTGTGATTTGCACTTCTTGA 876100 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556818910146320