Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zonotrichia_20albicollis_20[refseq_20GCF_5F000385455.1_202013-04-30] 6,018 sequences; 1,052,600,561 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq586 104 2e-17 >seq586 Length=108663 Score = 104 bits (114), Expect = 2e-17 Identities = 86/105 (82%), Gaps = 0/105 (0%) Strand=Plus/Plus Query 95105 CCCCCATGCCCACGGCCTCCACGGCGCAGATCCTTGGCAACAACGAGTCGTTCGAACCCT 95164 |||||||||||||||||||||| || |||||||| |||||||||||||| |||| |||| Sbjct 97682 CCCCCATGCCCACGGCCTCCACTGCCCAGATCCTGGGCAACAACGAGTCCATCGAGCCCT 97741 Query 95165 TCACCTCCAACGTGTACAACAGGCGGGTGCTCGCCGGGGAATTCC 95209 |||| |||| | |||| | |||||||| | ||||| |||| Sbjct 97742 ACACCAGCAACATCTACACGCGCAGGGTGCTCTCGGGGGAGTTCC 97786 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494685984447280