Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Zonotrichia_20albicollis_20[refseq_20GCF_5F000385455.1_202013-04-30]
6,018 sequences; 1,052,600,561 total letters
Query= NC_013668.3
Length=248526
Score E
Sequences producing significant alignments: (Bits) Value
seq586 98.7 2e-15
>seq586
Length=108663
Score = 98.7 bits (108), Expect = 2e-15
Identities = 87/109 (80%), Gaps = 0/109 (0%)
Strand=Plus/Minus
Query 203953 GTTGGGGTCGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCCCGATC 204012
|||||| || || ||||| |||||||| |||||||| ||||||||||| | | | | ||
Sbjct 99996 GTTGGGCTCAGCAATGTGGATGTTCAGGGACTGGCTCTGGTCGATGAAGGCCCCTCTGTC 99937
Query 204013 TGCGGCCATATTGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTTG 204061
||| ||||| || | ||||| || || || ||||||||||| ||||||
Sbjct 99936 TGCAGCCATCTTCAGGATGGTTTTTTGGGAGATCTCCCACACGGTCTTG 99888
Score = 86.0 bits (94), Expect = 1e-11
Identities = 100/135 (74%), Gaps = 0/135 (0%)
Strand=Plus/Minus
Query 204196 CTGAAAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGTGAATGGTTCGAACGC 204255
||| || || || || ||||||| || ||| | | |||| ||||| | || |||| |
Sbjct 97788 CTGGAACTCCCCCGAGAGCACCCTGCGCGTGTAGATGTTGCTGGTGTAGGGCTCGATGGA 97729
Query 204256 CTCGTTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGCCAGGAGCAGGGA 204315
|||||||||||| | ||||| || ||| ||||||||||||||| | | ||| |||
Sbjct 97728 CTCGTTGTTGCCCAGGATCTGGGCAGTGGAGGCCGTGGGCATGGGGGAAATGAGGAGGCT 97669
Query 204316 GTTGCGCACACCGTA 204330
||| | ||||||||
Sbjct 97668 GTTCCTGACACCGTA 97654
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 795095384450080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |