Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Zonotrichia_20albicollis_20[refseq_20GCF_5F000385455.1_202013-04-30]
6,018 sequences; 1,052,600,561 total letters
Query= NC_021249.1
Length=282895
Score E
Sequences producing significant alignments: (Bits) Value
seq47 93.3 8e-14
>seq47
Length=4964275
Score = 93.3 bits (102), Expect = 8e-14
Identities = 81/101 (80%), Gaps = 0/101 (0%)
Strand=Plus/Plus
Query 39168 TCATTACTAAAAGTTAATCCTGGCATTAATCCTCTCTTTTTAAGCCAAAATATTGATGCA 39227
|||||| |||||| | ||| |||||||||||||| || || |||||||| |||||||||
Sbjct 874380 TCATTAGAAAAAGTGAGTCCAGGCATTAATCCTCTTTTCTTCAGCCAAAAAATTGATGCA 874439
Query 39228 AAACTACTAGAAAAGAATATACCCTCCACACACGCAAATGC 39268
||| | ||||||||| || || |||||| ||||| ||
Sbjct 874440 AAAGAGCCAGAAAAGAAGATTCCTTCCACAGCTGCAAAAGC 874480
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 905067911144400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |