Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zonotrichia_20albicollis_20[refseq_20GCF_5F000385455.1_202013-04-30] 6,018 sequences; 1,052,600,561 total letters Query= NC_021249.1 Length=282895 Score E Sequences producing significant alignments: (Bits) Value seq47 93.3 8e-14 >seq47 Length=4964275 Score = 93.3 bits (102), Expect = 8e-14 Identities = 81/101 (80%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 39168 TCATTACTAAAAGTTAATCCTGGCATTAATCCTCTCTTTTTAAGCCAAAATATTGATGCA 39227 |||||| |||||| | ||| |||||||||||||| || || |||||||| ||||||||| Sbjct 874380 TCATTAGAAAAAGTGAGTCCAGGCATTAATCCTCTTTTCTTCAGCCAAAAAATTGATGCA 874439 Query 39228 AAACTACTAGAAAAGAATATACCCTCCACACACGCAAATGC 39268 ||| | ||||||||| || || |||||| ||||| || Sbjct 874440 AAAGAGCCAGAAAAGAAGATTCCTTCCACAGCTGCAAAAGC 874480 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 905067911144400