Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zonotrichia_20albicollis_20[refseq_20GCF_5F000385455.1_202013-04-30] 6,018 sequences; 1,052,600,561 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq129 113 4e-20 >seq129 Length=2407505 Score = 113 bits (124), Expect = 4e-20 Identities = 140/192 (73%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| || | | ||| || | || ||||||||||| || ||||| Sbjct 240159 CTCCTTCTGGATGTTGTAGTCAGAGAGGGTACGGCCATCTTCCAGCTGCTTGCCAGCAAA 240100 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 |||| || ||||||||| | ||| | || ||||||||| |||||| ||| | | | Sbjct 240099 GATCAGCCTCTGCTGGTCAGGAGGGATGCCTTCCTTGTCCTGGATCTTGGCCTTGACATT 240040 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | | ||||| || | || || || | ||||| || || || |||| || ||||| Sbjct 240039 TTCAATAGTGTCACTGGGCTCGACTTCAAGGGTGATGGTCTTGCCAGTCAGGGTCTTCAC 239980 Query 35725 AAATATCTGCAT 35736 ||| |||||||| Sbjct 239979 AAAGATCTGCAT 239968 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450759689051440