Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zonotrichia_20albicollis_20[refseq_20GCF_5F000385455.1_202013-04-30] 6,018 sequences; 1,052,600,561 total letters Query= NC_028238.1 Length=188534 Score E Sequences producing significant alignments: (Bits) Value seq34 127 2e-24 >seq34 Length=6428186 Score = 127 bits (140), Expect = 2e-24 Identities = 121/155 (78%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 32676 TGGTTATATTTTATCTCTAAAGGTATAGAATATCTAGATACTATTTTCTTCATAATGAGA 32735 |||| |||| | |||||||||| || || ||| | ||||| | |||||||| |||| Sbjct 1199976 TGGTGGTATTATGTCTCTAAAGGAATTGAGTATTTGGATACAGTATTCTTCATCCTGAGG 1199917 Query 32736 AAGAAATTTAACCAAGTTAGCTTTTTGCACGTATACCACCATTTTACCATGTTTACTTTA 32795 ||||||||||||||| |||| || | || || || |||||||| |||||||| || || Sbjct 1199916 AAGAAATTTAACCAAATTAGTTTCCTTCATGTCTATCACCATTTCACCATGTTCACCTTG 1199857 Query 32796 GGATGGATAGGGATTAAATGGTTTGCAGGAGGACA 32830 | ||||| || ||||| ||| ||||||| ||||| Sbjct 1199856 TGGTGGATTGGTATTAAGTGGGTTGCAGGTGGACA 1199822 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 603135425724320