Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Zosterops_20lateralis_20melanops_20[genbank_20GCA_5F001281735.1_2020
15-09-14] 2,933 sequences; 1,036,003,386 total letters
Query= NC_001350.1
Length=112930
Score E
Sequences producing significant alignments: (Bits) Value
seq2045 123 2e-23
seq2535 98.7 7e-16
>seq2045
Length=838734
Score = 123 bits (136), Expect = 2e-23
Identities = 100/120 (83%), Gaps = 1/120 (1%)
Strand=Plus/Minus
Query 4290 CTTTAGTTCCTTGCTGAGAACAACATTAATTCTGCCTTTTAAAGGCCGGTTCTTCTCAGG 4349
||| || ||| ||||||| |||| |||||||||| |||||||||| ||||||||||||||
Sbjct 513548 CTTGAGCTCCCTGCTGAGCACAATATTAATTCTGTCTTTTAAAGGACGGTTCTTCTCAGG 513489
Query 4350 AATTGAGAACCAAGTCTTTTTACCCATAATCACTAAATTCTGTTTATCTGGTACAGAAGA 4409
||| |||||||| || ||| ||||||| |||| | ||||||||| || | |||||||
Sbjct 513488 AATGGAGAACCACGTTTTTCTACCCATTATCAGTGCGTTCTGTTTACCT-GAGCAGAAGA 513430
>seq2535
Length=4254303
Score = 98.7 bits (108), Expect = 7e-16
Identities = 111/149 (74%), Gaps = 0/149 (0%)
Strand=Plus/Minus
Query 102033 CTTTATATTCTGCTCCGAAATGCCTCCACTGAAATCCATACACAGGTCCAAGATCTCCTT 102092
|||| ||||||||||| |||||||||||||| || |||||||| ||||| | ||| || |
Sbjct 4137318 CTTTGTATTCTGCTCCAAAATGCCTCCACTGGAAACCATACACTGGTCCTAAATCACCCT 4137259
Query 102093 CATCTCTGTCATAAAAACCAAGTTTATCTAAAAATGATCTAGATCCATTCGCATCCCAAA 102152
| |||||| ||||| | ||||| | || | || ||||| ||||||||||
Sbjct 4137258 CCTCTCTGGTGCTGAAACCCTGCTTATCCAGGAACTCACGGGACCCATTAGCATCCCAAA 4137199
Query 102153 TGTGCACGCCAGCTGCTGATAGCTCTTTG 102181
| | ||| || ||| || |||||||||
Sbjct 4137198 TCTTCACACCTTTTGCAGAGAGCTCTTTG 4137170
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 361238286737183
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |