Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zosterops_20lateralis_20melanops_20[genbank_20GCA_5F001281735.1_2020 15-09-14] 2,933 sequences; 1,036,003,386 total letters Query= NC_001731.1 Length=190289 Score E Sequences producing significant alignments: (Bits) Value seq869 141 1e-28 seq2229 100 3e-16 >seq869 Length=1738336 Score = 141 bits (156), Expect = 1e-28 Identities = 161/214 (75%), Gaps = 4/214 (2%) Strand=Plus/Plus Query 83143 GAACTTCTCGAAGTTCCAGGCCACGTCGTTGCGGCACACTGGAGACCAGGCAATGAGCTG 83202 ||||||||||||||||||||| | ||| |||||||| || || |||||| ||| ||| Sbjct 937859 GAACTTCTCGAAGTTCCAGGCGATGTCATTGCGGCAGACCGGGGACCAGATGATGTACTG 937918 Query 83203 GGGGTCGCTCACGAGCGTGCTCATGTCGTCGCTAGGCGCCGGCAGGGCCTCTCGTAGGAA 83262 |||| | ||| |||| | ||||||| || ||||| |||||| ||||| Sbjct 937919 CGGGTTGGTCATCAGCGAGGAGGGGTCGTCGTGCGGGAAGGGCAGCGCCTCTTTCAGGAA 937978 Query 83263 GGCGAAGAGCGGATGTGC--CCTTGCACCGTTGACCTCGCACTTCTCGAAGAGCATAAAG 83320 || |||||| || ||||| |||| ||||| ||||||||||||||||| | || || Sbjct 937979 GGTGAAGAGGGGGTGTGCGTCCTT--TCCGTTCACCTCGCACTTCTCGAACATTATGAAA 938036 Query 83321 TTCGGCTCGAAGCCGTTCCCAGGACGGACGTGCT 83354 || |||| ||| || || |||||||| ||||||| Sbjct 938037 TTGGGCTTGAACCCCTTGCCAGGACGAACGTGCT 938070 >seq2229 Length=482378 Score = 100 bits (110), Expect = 3e-16 Identities = 116/154 (75%), Gaps = 3/154 (2%) Strand=Plus/Plus Query 83388 TTTCCTGGTGACCGAACTGGTTACACGGGAACCCAAGCACTACCAGCCCCCGAGCTCCTA 83447 || |||||| || ||||||||||| ||||| || ||||| ||||||| ||| | || Sbjct 99979 TTACCTGGTATCCAAACTGGTTACAGGGGAAGCCCAGCACGACCAGCCGCCGGG--GGTA 100036 Query 83448 GGCGCCGCTGCAGCTCGTTCATCTGAGTGTACTCCCGGACCGTGCTACCTCAGAGGGACG 83507 ||| || |||| ||| | ||| ||||| ||||| |||||| | |||||||| || | Sbjct 100037 -GCGGGCTTGGAGCTGGTTGAGCTGGGTGTAATCCCGCACCGTGGTGCCTCAGAGCGAAG 100095 Query 83508 CTACGTTCTCGATGAGCAAGACCCGGCCCCGTAA 83541 | |||||||| || || | || |||||||| || Sbjct 100096 CCACGTTCTCAATCAGGACCACGCGGCCCCGGAA 100129 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 608774479987320