Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zosterops_20lateralis_20melanops_20[genbank_20GCA_5F001281735.1_2020 15-09-14] 2,933 sequences; 1,036,003,386 total letters Query= NC_001875.2 Length=131995 Score E Sequences producing significant alignments: (Bits) Value seq2502 123 2e-23 >seq2502 Length=4400873 Score = 123 bits (136), Expect = 2e-23 Identities = 166/231 (72%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 20945 GTTTCCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTC 21004 ||| || || ||||| | | || | |||| ||| |||||||| || ||||| ||||| Sbjct 928810 GTTACCACCCCGCAGGCGCAAGACAAGGTGCAGAGTTGACTCCTTCTGGATGTTGTAGTC 928751 Query 21005 CGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCAC 21064 | |||||| || | |||||||||||||| || ||| | || || ||||||||||| Sbjct 928750 AGACAGGGTACGGCCATCCTCCAGCTGTTTCCCAGCAAAGATCAGCCTCTGCTGGTCAGG 928691 Query 21065 GGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTC 21124 || | ||||||||| || |||||| ||| || | | | || |||| |||||| Sbjct 928690 AGGGATGCCTTCCTTATCCTGGATCTTGGCTTTGACATTTTCAATGGTGTCACTGGGCTC 928631 Query 21125 CGTTTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 ||||| || || |||||||| || | || |||||||| || ||||| Sbjct 928630 GACTTCCAGAGTGATTGTCTTGCCCGTCAGGGTCTTGACAAAGATCTGCAT 928580 Score = 122 bits (134), Expect = 7e-23 Identities = 156/215 (73%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 20964 AGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCC 21023 ||||||| |||| |||||| || || || ||||| ||||| | ||||| || | ||| Sbjct 928195 AGCACCAAGTGCAGAGTGGATTCTTTCTGGATGTTGTAGTCGGAGAGGGTACGGCCATCC 928136 Query 21024 TCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCG 21083 |||||||| ||||| || |||| || ||||||||||| || | |||||||||||| Sbjct 928135 TCCAGCTGCTTGCCAGCGAAAATGAGCCTCTGCTGGTCAGGAGGGATGCCTTCCTTGTCT 928076 Query 21084 GCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTC 21143 |||||| || || | | | || || | ||||||| || | ||| |||||| Sbjct 928075 TGGATCTTGGCCTTGACATTCTCAATGGTGTCGCTGGGCTCCACCTCAAGGGTGATGGTC 928016 Query 21144 TTGCCGGTTAACGTTTTGACAAATATTTGCATTTT 21178 ||||| || | || ||||| || || |||||||| Sbjct 928015 TTGCCCGTCAGGGTCTTGACGAAGATCTGCATTTT 927981 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 422244105949028