Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Zosterops_20lateralis_20melanops_20[genbank_20GCA_5F001281735.1_2020
15-09-14] 2,933 sequences; 1,036,003,386 total letters
Query= NC_001987.1
Length=108409
Score E
Sequences producing significant alignments: (Bits) Value
seq2535 95.1 8e-15
>seq2535
Length=4254303
Score = 95.1 bits (104), Expect = 8e-15
Identities = 110/148 (74%), Gaps = 8/148 (5%)
Strand=Plus/Minus
Query 97402 TATTCTGCTCCAAAATGCCTCCATTGGAATCCATAAACAGGTCCAAGGTCTCCTTCTTCT 97461
||||||||||||||||||||||| ||||| ||||| || ||||| | || || || |||
Sbjct 4137313 TATTCTGCTCCAAAATGCCTCCACTGGAAACCATACACTGGTCCTAAATCACCCTCCTCT 4137254
Query 97462 CTATCACAGAAACCAAGCTTATCTAAATAGGACCT----AGATCCATTTGCATCCCAAAT 97517
|| | |||||| ||||||| |||| || || ||||| |||||||||||
Sbjct 4137253 CTGGTGCTGAAACCCTGCTTATC----CAGGAACTCACGGGACCCATTAGCATCCCAAAT 4137198
Query 97518 GTGCACACCAGATGCTGCAAGCTCTTTG 97545
| |||||| ||| | |||||||||
Sbjct 4137197 CTTCACACCTTTTGCAGAGAGCTCTTTG 4137170
Score = 86.0 bits (94), Expect = 4e-12
Identities = 122/172 (71%), Gaps = 0/172 (0%)
Strand=Plus/Minus
Query 97117 GTGACATGGGCGATCATACAAGTTAATAGAGAATAGCTAGCAATGTTAAAAGGCACCCCT 97176
||||||||||| ||||| | || | || |||||||| ||||| || |||||||| |||
Sbjct 4141004 GTGACATGGGCAATCATGTATGTGAGCAGTGAATAGCTGGCAATATTGAAAGGCACTCCT 4140945
Query 97177 AGTCCCATATCAGCTGATCTTTGATATAACTGACAGGAAAGCTTTCCATCACACACATAA 97236
|||||||| || | || || ||||| | || || || | | |||| |||||
Sbjct 4140944 AGTCCCATGTCTCCAGACCTCTGATAGAGTTGGCAAGACAATTCACCATTTAGAACATAG 4140885
Query 97237 AACTGACTCAATACATGACAGGGGGGCAACGCCATTTTTGGAACATCTAAGA 97288
||||| | | |||| || || ||||| ||||| | || ||||||||
Sbjct 4140884 AACTGGCAAAGGGCATGGCAYGGAGGCAAAGCCATCAGGGAAATATCTAAGA 4140833
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 346771603880810
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |