Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zosterops_20lateralis_20melanops_20[genbank_20GCA_5F001281735.1_2020 15-09-14] 2,933 sequences; 1,036,003,386 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq2350 86.0 1e-11 >seq2350 Length=253660 Score = 86.0 bits (94), Expect = 1e-11 Identities = 96/129 (74%), Gaps = 0/129 (0%) Strand=Plus/Plus Query 248893 CAGCACATGTTGATGCGAGTGGCTGTCGGGATTCACAAGGATGACATAGAGAGCGTGCTC 248952 ||||||||| ||||| | ||| |||| ||||| ||||||| ||||| || || || Sbjct 172868 CAGCACATGCTGATGAGGGTGTCTGTGGGGATCCACAAGGGYGACATCGACGCCGCCATC 172927 Query 248953 GAGACGTACACCGGAATGAGTGAACGCTGGATGACACATGCCACACCGACGCTCTTCAAC 249012 ||||| |||| | || || |||||| | || || ||| | || |||||||||||| Sbjct 172928 GAGACCTACAACCTGCTGTCGGAGCGCTGGTTCACGCACGCCTCGCCCACGCTCTTCAAC 172987 Query 249013 GCCGGTACC 249021 ||||| ||| Sbjct 172988 GCCGGCACC 172996 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1073726048865344