Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zosterops_20lateralis_20melanops_20[genbank_20GCA_5F001281735.1_2020 15-09-14] 2,933 sequences; 1,036,003,386 total letters Query= NC_002816.1 Length=123500 Score E Sequences producing significant alignments: (Bits) Value seq2502 109 4e-19 >seq2502 Length=4400873 Score = 109 bits (120), Expect = 4e-19 Identities = 153/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 ||||||||||| ||| || ||||| |||||||||||| || || | || ||| Sbjct 928192 ACCAAGTGCAGAGTGGATTCTTTCTGGATGTTGTAGTCGGAGAGGGTACGGCCATCCTCC 928133 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 || || || || ||||| || | || ||| ||||| ||||| | || |||||||| Sbjct 928132 AGCTGCTTGCCAGCGAAAATGAGCCTCTGCTGGTCAGGAGGGATGCCTTCCTTGTCTTGG 928073 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 || || ||| || | | | | |||| | ||||||||| | ||| || |||||| Sbjct 928072 ATCTTGGCCTTGACATTCTCAATGGTGTCGCTGGGCTCCACCTCAAGGGTGATGGTCTTG 928013 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCATGTTGCC 45342 |||||||| ||||| || ||||| ||||| || || Sbjct 928012 CCCGTCAGGGTCTTGACGAAGATCTGCATTTTTCC 927978 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 395061077666593