Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Zosterops_20lateralis_20melanops_20[genbank_20GCA_5F001281735.1_2020
15-09-14] 2,933 sequences; 1,036,003,386 total letters
Query= NC_004002.1
Length=149955
Score E
Sequences producing significant alignments: (Bits) Value
seq2912 123 2e-23
seq2369 111 2e-19
>seq2912
Length=3111161
Score = 123 bits (136), Expect = 2e-23
Identities = 109/136 (80%), Gaps = 0/136 (0%)
Strand=Plus/Plus
Query 13894 CCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGttttt 13953
||||||||||||| || |||||||| ||||| || | ||| ||||| ||||||| ||| |
Sbjct 1998341 CCTCATCTCTACTGATGAGTTCGTTAGAAAAAGTGAGTCCAGGCATTAATCCTCTTTTCT 1998400
Query 13954 ttAACCAAAATATTGCAGCAAATGACCCGGAAAAGAATATTCCCTCAACTGCAGCAAACG 14013
| | |||||| |||| ||||| || || |||||||| ||||| || || || ||||| |
Sbjct 1998401 TCAGCCAAAAAATTGATGCAAAAGAGCCAGAAAAGAAGATTCCTTCCACAGCTGCAAAGG 1998460
Query 14014 CTATTAATCGTTCTCC 14029
||| || ||||||||
Sbjct 1998461 CTACTACACGTTCTCC 1998476
>seq2369
Length=237747
Score = 111 bits (122), Expect = 2e-19
Identities = 97/121 (80%), Gaps = 0/121 (0%)
Strand=Plus/Minus
Query 13894 CCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGttttt 13953
|||||||||| ||||||||||| || || || || ||||| ||||||| || | || |
Sbjct 220111 CCTCATCTCTGCTAATAAGTTCATTGGAGAAAGTCAATCCAGGCATCAGGCCCCTCTTCT 220052
Query 13954 ttAACCAAAATATTGCAGCAAATGACCCGGAAAAGAATATTCCCTCAACTGCAGCAAACG 14013
| | ||||||||| |||||||| || || |||||||| || || || ||||||||||| |
Sbjct 220051 TCAGCCAAAATATAGCAGCAAAGGAACCCGAAAAGAAGATGCCTTCCACTGCAGCAAAGG 219992
Query 14014 C 14014
|
Sbjct 219991 C 219991
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 479710411972200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |