Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zosterops_20lateralis_20melanops_20[genbank_20GCA_5F001281735.1_2020 15-09-14] 2,933 sequences; 1,036,003,386 total letters Query= NC_005832.1 Length=106332 Score E Sequences producing significant alignments: (Bits) Value seq2535 123 2e-23 >seq2535 Length=4254303 Score = 123 bits (136), Expect = 2e-23 Identities = 141/184 (77%), Gaps = 4/184 (2%) Strand=Plus/Minus Query 25773 CATGTCCGTGTACTCTGCTCCGAAATACCTCCACTGGAACCCGTACACCGGTCCTAGGTC 25832 ||| || |||| |||||||| |||| |||||||||||| || ||||| ||||||| || Sbjct 4137323 CATATCTTTGTATTCTGCTCCAAAATGCCTCCACTGGAAACCATACACTGGTCCTAAATC 4137264 Query 25833 TCCATCTTCCCTG-TGCTCAAAGCCCCTCTTATCCAAAAAGTCTCTGGAACCATTGGCGT 25891 || || || ||| |||| ||| ||| |||||||| || || | ||| ||||| || | Sbjct 4137263 ACCCTCCTCTCTGGTGCTGAAA-CCCTGCTTATCCAGGAACTCACGGGACCCATTAGCAT 4137205 Query 25892 CCCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACC 25951 |||| ||||| || || || | ||||||||||||| ||||| || || || || || | Sbjct 4137204 CCCAAATCTTCACACCTTTTGCAGAGAGCTCTTTGGCATTTGTAGAACC-CT-ACAAAAC 4137147 Query 25952 ACAG 25955 |||| Sbjct 4137146 ACAG 4137143 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 340125441462609