Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Zosterops_20lateralis_20melanops_20[genbank_20GCA_5F001281735.1_2020
15-09-14] 2,933 sequences; 1,036,003,386 total letters
Query= NC_006549.1
Length=140131
Score E
Sequences producing significant alignments: (Bits) Value
seq2502 100 3e-16
>seq2502
Length=4400873
Score = 100 bits (110), Expect = 3e-16
Identities = 151/215 (70%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 94793 CGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAA 94852
|||| ||||||||||| ||| ||||| || || | ||| || ||| | || | |
Sbjct 928198 CGCAGCACCAAGTGCAGAGTGGATTCTTTCTGGATGTTGTAGTCGGAGAGGGTACGGCCA 928139
Query 94853 TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTG 94912
||||||||||| || || | || || | || ||||| || ||||| || ||||| |||
Sbjct 928138 TCCTCCAGCTGCTTGCCAGCGAAAATGAGCCTCTGCTGGTCAGGAGGGATGCCTTCCTTG 928079
Query 94913 TCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATG 94972
|| | || || |||||||| | | ||||| | | || || |||| ||||||
Sbjct 928078 TCTTGGATCTTGGCCTTGACATTCTCAATGGTGTCGCTGGGCTCCACCTCAAGGGTGATG 928019
Query 94973 GTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
|| || || || || || || || |||||||||||
Sbjct 928018 GTCTTGCCCGTCAGGGTCTTGACGAAGATCTGCAT 927984
Score = 100 bits (110), Expect = 3e-16
Identities = 151/215 (70%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 94793 CGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAA 94852
||||| || | ||||| ||| || ||||| || | ||| || || || || | |
Sbjct 928794 CGCAAGACAAGGTGCAGAGTTGACTCCTTCTGGATGTTGTAGTCAGACAGGGTACGGCCA 928735
Query 94853 TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTG 94912
|||||||||||||| || ||||||| | || ||||| || ||||| || ||||| ||
Sbjct 928734 TCCTCCAGCTGTTTCCCAGCAAAGATCAGCCTCTGCTGGTCAGGAGGGATGCCTTCCTTA 928675
Query 94913 TCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATG 94972
|| | || || || ||||| | | |||||| | | ||||| || | |||||
Sbjct 928674 TCCTGGATCTTGGCTTTGACATTTTCAATGGTGTCACTGGGCTCGACTTCCAGAGTGATT 928615
Query 94973 GTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
|| || || || || || || ||||||||||||||
Sbjct 928614 GTCTTGCCCGTCAGGGTCTTGACAAAGATCTGCAT 928580
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 448274764523880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |