Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Zosterops_20lateralis_20melanops_20[genbank_20GCA_5F001281735.1_2020
15-09-14] 2,933 sequences; 1,036,003,386 total letters
Query= NC_008035.3
Length=126629
Score E
Sequences producing significant alignments: (Bits) Value
seq2502 113 4e-20
>seq2502
Length=4400873
Score = 113 bits (124), Expect = 4e-20
Identities = 157/218 (72%), Gaps = 4/218 (2%)
Strand=Plus/Minus
Query 16723 CAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTC 16782
||| |||| ||||| ||||| || || || ||||||||||||| | ||| | | ||
Sbjct 928196 CAGCACCAAGTGCAGAGTGGATTCTTTCTGGATGTTGTAGTCGGAGAGGGTACGGCCATC 928137
Query 16783 CTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC 16842
||||| || ||||| || |||| |||| ||| ||||| ||| | ||| || |||||
Sbjct 928136 CTCCAGCTGCTTGCCAGCGAAAATGAGCCTCTGCTGGTCAGGAGGGATGCCTTCCTTGTC 928077
Query 16843 --GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATG 16900
|| || || ||| || | | | ||||||| ||||||| || | |||||||
Sbjct 928076 TTGGATCTTGGC--CTTGACATTCTCAATGGTGTCGCTGGGCTCCACCTCAAGGGTGATG 928019
Query 16901 GTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATTTT 16938
|| || || ||||| || ||||| || |||||||||||
Sbjct 928018 GTCTTGCCCGTCAGGGTCTTGACGAAGATCTGCATTTT 927981
Score = 98.7 bits (108), Expect = 8e-16
Identities = 146/205 (71%), Gaps = 4/205 (2%)
Strand=Plus/Minus
Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792
||||| || |||||||| || ||||||||||| | || ||| | | ||||||| |||
Sbjct 928782 TGCAGAGTTGACTCCTTCTGGATGTTGTAGTCAGACAGGGTACGGCCATCCTCCAGCTGT 928723
Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC--GGCAATTT 16850
|| || ||| | || |||| ||| ||||| ||| | ||| || || || || ||
Sbjct 928722 TTCCCAGCAAAGATCAGCCTCTGCTGGTCAGGAGGGATGCCTTCCTTATCCTGGATCTTG 928663
Query 16851 GCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGG 16910
||| || || | | | ||||| | |||||| ||||| ||||| || || || |
Sbjct 928662 GCT--TTGACATTTTCAATGGTGTCACTGGGCTCGACTTCCAGAGTGATTGTCTTGCCCG 928605
Query 16911 TCAGCGTTTTGACAAAAATCTGCAT 16935
|||| || |||||||| ||||||||
Sbjct 928604 TCAGGGTCTTGACAAAGATCTGCAT 928580
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 405073519749670
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |