Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Zosterops_20lateralis_20melanops_20[genbank_20GCA_5F001281735.1_2020
15-09-14] 2,933 sequences; 1,036,003,386 total letters
Query= NC_008168.1
Length=104710
Score E
Sequences producing significant alignments: (Bits) Value
seq2527 114 9e-21
seq2498 93.3 3e-14
>seq2527
Length=97327
Score = 114 bits (126), Expect = 9e-21
Identities = 82/95 (86%), Gaps = 5/95 (5%)
Strand=Plus/Plus
Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956
|||||||||||||||||||||||||| || |||||||| ||||| || ||||| ||
Sbjct 80782 AAGCCCGTTCCCTTGGCTGTGGTTTCRCTGGATAGTAGGTAGGGACAGTGGGAATCTTGT 80841
Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991
| |||| ||||||| ||||||||||||||||||||
Sbjct 80842 TCATCCATTCATGCACGTCACTAATTAGATGACGA 80876
>seq2498
Length=114767
Score = 93.3 bits (102), Expect = 3e-14
Identities = 77/95 (81%), Gaps = 5/95 (5%)
Strand=Plus/Plus
Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956
|||||| ||||||||||||||||||| || |||||| | ||||| || |||||| |
Sbjct 100254 AAGCCCTTTCCCTTGGCTGTGGTTTCACTGGATAGTRGGTAGGGACTGTGGGAATCTCAT 100313
Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991
| ||| |||||| || ||||||||||||||| ||
Sbjct 100314 TCATCTATTCATGTGCATCACTAATTAGATGATGA 100348
Score = 93.3 bits (102), Expect = 3e-14
Identities = 77/95 (81%), Gaps = 5/95 (5%)
Strand=Plus/Plus
Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956
||||| ||||||||||||||||||| || | |||||| ||||| || ||||| ||
Sbjct 108121 AAGCCTATTCCCTTGGCTGTGGTTTCTCTGGGTAGTAGGTAGGGACAGTGGGAATCTTGT 108180
Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991
| |||| ||||||| | ||||||||||||||| ||
Sbjct 108181 TCATCCATTCATGCACATCACTAATTAGATGAYGA 108215
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 334935226998323
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |