Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zosterops_20lateralis_20melanops_20[genbank_20GCA_5F001281735.1_2020 15-09-14] 2,933 sequences; 1,036,003,386 total letters Query= NC_008168.1 Length=104710 Score E Sequences producing significant alignments: (Bits) Value seq2527 114 9e-21 seq2498 93.3 3e-14 >seq2527 Length=97327 Score = 114 bits (126), Expect = 9e-21 Identities = 82/95 (86%), Gaps = 5/95 (5%) Strand=Plus/Plus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||||||||||||||||||||||| || |||||||| ||||| || ||||| || Sbjct 80782 AAGCCCGTTCCCTTGGCTGTGGTTTCRCTGGATAGTAGGTAGGGACAGTGGGAATCTTGT 80841 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 | |||| ||||||| |||||||||||||||||||| Sbjct 80842 TCATCCATTCATGCACGTCACTAATTAGATGACGA 80876 >seq2498 Length=114767 Score = 93.3 bits (102), Expect = 3e-14 Identities = 77/95 (81%), Gaps = 5/95 (5%) Strand=Plus/Plus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||| ||||||||||||||||||| || |||||| | ||||| || |||||| | Sbjct 100254 AAGCCCTTTCCCTTGGCTGTGGTTTCACTGGATAGTRGGTAGGGACTGTGGGAATCTCAT 100313 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 | ||| |||||| || ||||||||||||||| || Sbjct 100314 TCATCTATTCATGTGCATCACTAATTAGATGATGA 100348 Score = 93.3 bits (102), Expect = 3e-14 Identities = 77/95 (81%), Gaps = 5/95 (5%) Strand=Plus/Plus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 ||||| ||||||||||||||||||| || | |||||| ||||| || ||||| || Sbjct 108121 AAGCCTATTCCCTTGGCTGTGGTTTCTCTGGGTAGTAGGTAGGGACAGTGGGAATCTTGT 108180 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 | |||| ||||||| | ||||||||||||||| || Sbjct 108181 TCATCCATTCATGCACATCACTAATTAGATGAYGA 108215 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 334935226998323