Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Zosterops_20lateralis_20melanops_20[genbank_20GCA_5F001281735.1_2020
15-09-14] 2,933 sequences; 1,036,003,386 total letters
Query= NC_008586.1
Length=131204
Score E
Sequences producing significant alignments: (Bits) Value
seq2502 116 3e-21
>seq2502
Length=4400873
Score = 116 bits (128), Expect = 3e-21
Identities = 157/219 (72%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 22215 AAAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAAC 22274
||| ||||| || || || || || | || || || || |||| ||||| ||||| |
Sbjct 927980 AAAAATGCAGATCTTCGTCAAGACCCTGACGGGCAAGACCATCACCCTTGAGGTGGAGCC 928039
Query 22275 CACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGA 22334
|| ||| ||| | || || |||| || || ||||||||||| || || || || ||
Sbjct 928040 CAGCGACACCATTGAGAATGTCAAGGCCAAGATCCAAGACAAGGAAGGCATCCCTCCTGA 928099
Query 22335 TCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTA 22394
|| || | || || || || ||||| ||| | |||||| ||| ||| ||||||| ||
Sbjct 928100 CCAGCAGAGGCTCATTTTCGCTGGCAAGCAGCTGGAGGATGGCCGTACCCTCTCCGACTA 928159
Query 22395 CAACATTCAAAAAGAATCCACCATACATTTAGTTTTGCG 22433
|||||| || ||||||||||| | || || || ||||
Sbjct 928160 CAACATCCAGAAAGAATCCACTCTGCACTTGGTGCTGCG 928198
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 419712996429145
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |