Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Zosterops_20lateralis_20melanops_20[genbank_20GCA_5F001281735.1_2020
15-09-14] 2,933 sequences; 1,036,003,386 total letters
Query= NC_008603.1
Length=321240
Score E
Sequences producing significant alignments: (Bits) Value
seq1617 95.1 2e-14
seq308 91.5 3e-13
>seq1617
Length=1088743
Score = 95.1 bits (104), Expect = 2e-14
Identities = 65/72 (90%), Gaps = 1/72 (1%)
Strand=Plus/Plus
Query 142053 GTCTCTGTGGCGCAATGGAC-AGCGCGTTGGACTTCTAATCCAAAGGTTGCGGGTTCGAC 142111
|||||||||||||||||||| |||||| ||||||||||||||| ||||| |||||||||
Sbjct 203120 GTCTCTGTGGCGCAATGGACGAGCGCGCTGGACTTCTAATCCAGAGGTTCCGGGTTCGAG 203179
Query 142112 CCCCGCCAGAGA 142123
|||| ||||||
Sbjct 203180 TCCCGGCAGAGA 203191
>seq308
Length=10524
Score = 91.5 bits (100), Expect = 3e-13
Identities = 64/73 (88%), Gaps = 0/73 (0%)
Strand=Plus/Minus
Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562
||||||| |||||||||||||||||| ||||||||||||| |||||||||||||||
Sbjct 1534 AGCCCGGCTAGCTCAGTCGGTAGAGCATAAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 1475
Query 142563 CCCCACATCGGGC 142575
|||||| | ||||
Sbjct 1474 CCCCACGTTGGGC 1462
Score = 91.5 bits (100), Expect = 3e-13
Identities = 64/73 (88%), Gaps = 0/73 (0%)
Strand=Plus/Minus
Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562
||||||| |||||||||||||||||| ||||||||||||| |||||||||||||||
Sbjct 4150 AGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 4091
Query 142563 CCCCACATCGGGC 142575
|||||| | ||||
Sbjct 4090 CCCCACGTTGGGC 4078
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1027798174856653
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |