Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Zosterops_20lateralis_20melanops_20[genbank_20GCA_5F001281735.1_2020
15-09-14] 2,933 sequences; 1,036,003,386 total letters
Query= NC_009898.1
Length=368683
Score E
Sequences producing significant alignments: (Bits) Value
seq2502 120 7e-22
>seq2502
Length=4400873
Score = 120 bits (132), Expect = 7e-22
Identities = 141/191 (74%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342
|| || ||||| || ||||| | || || || || || || | ||||| || || |||
Sbjct 928770 TCCTTCTGGATGTTGTAGTCAGACAGGGTACGGCCATCCTCCAGCTGTTTCCCAGCAAAG 928711
Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402
||||| | ||| || | ||||| ||||| ||||||||||| || ||||| || |||
Sbjct 928710 ATCAGCCTCTGCTGGTCAGGAGGGATGCCTTCCTTATCCTGGATCTTGGCTTTGACATTT 928651
Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462
|| || | || || | || ||||| || ||||| ||||| || ||||| ||||||||
Sbjct 928650 TCAATGGTGTCACTGGGCTCGACTTCCAGAGTGATTGTCTTGCCCGTCAGGGTCTTGACA 928591
Query 288463 AATATCTGCAT 288473
|| ||||||||
Sbjct 928590 AAGATCTGCAT 928580
Score = 114 bits (126), Expect = 3e-20
Identities = 141/193 (73%), Gaps = 0/193 (0%)
Strand=Plus/Minus
Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341
|||||| ||||| || ||||||| ||| || || || || || | || || || |||||
Sbjct 928175 TTCTTTCTGGATGTTGTAGTCGGAGAGGGTACGGCCATCCTCCAGCTGCTTGCCAGCGAA 928116
Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401
|| || | ||| || | ||||| ||||| || || ||||| || || || || ||
Sbjct 928115 AATGAGCCTCTGCTGGTCAGGAGGGATGCCTTCCTTGTCTTGGATCTTGGCCTTGACATT 928056
Query 288402 TTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461
|| || | ||||| | || || || || ||||| ||||| || ||||| ||||||||
Sbjct 928055 CTCAATGGTGTCGCTGGGCTCCACCTCAAGGGTGATGGTCTTGCCCGTCAGGGTCTTGAC 927996
Query 288462 GAATATCTGCATT 288474
||| |||||||||
Sbjct 927995 GAAGATCTGCATT 927983
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1179610069693574
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |