Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zosterops_20lateralis_20melanops_20[genbank_20GCA_5F001281735.1_2020 15-09-14] 2,933 sequences; 1,036,003,386 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq2502 120 7e-22 >seq2502 Length=4400873 Score = 120 bits (132), Expect = 7e-22 Identities = 141/191 (74%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || ||||| || ||||| | || || || || || || | ||||| || || ||| Sbjct 928770 TCCTTCTGGATGTTGTAGTCAGACAGGGTACGGCCATCCTCCAGCTGTTTCCCAGCAAAG 928711 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 ||||| | ||| || | ||||| ||||| ||||||||||| || ||||| || ||| Sbjct 928710 ATCAGCCTCTGCTGGTCAGGAGGGATGCCTTCCTTATCCTGGATCTTGGCTTTGACATTT 928651 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || || | || || | || ||||| || ||||| ||||| || ||||| |||||||| Sbjct 928650 TCAATGGTGTCACTGGGCTCGACTTCCAGAGTGATTGTCTTGCCCGTCAGGGTCTTGACA 928591 Query 288463 AATATCTGCAT 288473 || |||||||| Sbjct 928590 AAGATCTGCAT 928580 Score = 114 bits (126), Expect = 3e-20 Identities = 141/193 (73%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 |||||| ||||| || ||||||| ||| || || || || || | || || || ||||| Sbjct 928175 TTCTTTCTGGATGTTGTAGTCGGAGAGGGTACGGCCATCCTCCAGCTGCTTGCCAGCGAA 928116 Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401 || || | ||| || | ||||| ||||| || || ||||| || || || || || Sbjct 928115 AATGAGCCTCTGCTGGTCAGGAGGGATGCCTTCCTTGTCTTGGATCTTGGCCTTGACATT 928056 Query 288402 TTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461 || || | ||||| | || || || || ||||| ||||| || ||||| |||||||| Sbjct 928055 CTCAATGGTGTCGCTGGGCTCCACCTCAAGGGTGATGGTCTTGCCCGTCAGGGTCTTGAC 927996 Query 288462 GAATATCTGCATT 288474 ||| ||||||||| Sbjct 927995 GAAGATCTGCATT 927983 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179610069693574