Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zosterops_20lateralis_20melanops_20[genbank_20GCA_5F001281735.1_2020 15-09-14] 2,933 sequences; 1,036,003,386 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq2350 98.7 1e-15 >seq2350 Length=253660 Score = 98.7 bits (108), Expect = 1e-15 Identities = 87/106 (82%), Gaps = 2/106 (2%) Strand=Plus/Plus Query 95105 CCCCCATGCCCACGGCCTCCACGGCGCAGATCCTTGGCAACAACGAGTCGTTCGAACCCT 95164 ||||||||||||| |||||||| || |||||||| |||||||||||||| |||| |||| Sbjct 182089 CCCCCATGCCCACAGCCTCCACTGCCCAGATCCTGGGCAACAACGAGTCCATCGAGCCCT 182148 Query 95165 TCACCTCCAACGTGTACAACAGGC-GGGTGCTCGCCGGGGAATTCC 95209 |||| |||| | ||| ||| || |||| ||| | ||||| |||| Sbjct 182149 ACACCAGCAACATCTAC-ACACGCAGGGTCCTCTCTGGGGAGTTCC 182193 Score = 82.4 bits (90), Expect = 8e-11 Identities = 57/65 (88%), Gaps = 0/65 (0%) Strand=Plus/Plus Query 94096 TCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAACGCGGCGCGCTACGTGGACCAG 94155 |||||||| |||||||| |||||| |||||| ||||||| | || ||||||||||| ||| Sbjct 175058 TCCAACGGGCTCGTCCCCATGCTCAGGGTCTACAACAACACCGCCCGCTACGTGGATCAG 175117 Query 94156 GGTGG 94160 ||||| Sbjct 175118 GGTGG 175122 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494705062210680