Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Zosterops_20lateralis_20melanops_20[genbank_20GCA_5F001281735.1_2020
15-09-14] 2,933 sequences; 1,036,003,386 total letters
Query= NC_013756.1
Length=368454
Score E
Sequences producing significant alignments: (Bits) Value
seq2502 127 5e-24
>seq2502
Length=4400873
Score = 127 bits (140), Expect = 5e-24
Identities = 159/218 (73%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468
|| || | || ||||||||| ||||| |||||||| |||| ||||||||||| || ||
Sbjct 928800 CGCAGGCGCAAGACAAGGTGCAGAGTTGACTCCTTCTGGATGTTGTAGTCAGACAGGGTA 928741
Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528
| ||||| |||||||| || || || ||||| || | ||||||||| ||| || |||
Sbjct 928740 CGGCCATCCTCCAGCTGTTTCCCAGCAAAGATCAGCCTCTGCTGGTCAGGAGGGATGCCT 928681
Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588
|| ||||| ||||| || || ||| | |||||| | | || || ||||
Sbjct 928680 TCCTTATCCTGGATCTTGGCTTTGACATTTTCAATGGTGTCACTGGGCTCGACTTCCAGA 928621
Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
||||| ||||| ||||| || || || ||||| || ||
Sbjct 928620 GTGATTGTCTTGCCCGTCAGGGTCTTGACAAAGATCTG 928583
Score = 96.9 bits (106), Expect = 8e-15
Identities = 153/219 (70%), Gaps = 3/219 (1%)
Strand=Plus/Minus
Query 199417 CAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATC 199476
||| || | ||| ||||| || || || |||| ||||||||| | | || | |||||
Sbjct 928196 CAGCACCAAGTGCAGAGTGGATTCTTTCTGGATGTTGTAGTCGGAGAGGGTACGGCCATC 928137
Query 199477 TTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTC 199536
||||||||||| || ||||| ||||| | ||||||||| ||| || ||||| ||
Sbjct 928136 CTCCAGCTGCTTGCCAGCGAAAATGAGCCTCTGCTGGTCAGGAGGGATGCCTTCCTTGTC 928077
Query 199537 CTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGT 199596
|| ||||| ||| || || | |||||| | | || || || | ||||| ||
Sbjct 928076 TTGGATCTTGGCCTTGACATTCTCAATGGTGTCGCTGGGCTCCACCTCAAGGGTGATGGT 928017
Query 199597 CTTACCCGTGAGAGTTTTCACAAAAATTTGGTACATTTT 199635
||| ||||| || || || || || || || ||||||
Sbjct 928016 CTTGCCCGTCAGGGTCTTGACGAAGATCTG---CATTTT 927981
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1178877297231511
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |