Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Zosterops_20lateralis_20melanops_20[genbank_20GCA_5F001281735.1_2020
15-09-14] 2,933 sequences; 1,036,003,386 total letters
Query= NC_013772.1
Length=176677
Score E
Sequences producing significant alignments: (Bits) Value
seq2502 127 2e-24
>seq2502
Length=4400873
Score = 127 bits (140), Expect = 2e-24
Identities = 159/218 (73%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 46379 CGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCG 46438
|||| ||||| |||| || || || ||||| ||||||||||| || || || |
Sbjct 928198 CGCAGCACCAAGTGCAGAGTGGATTCTTTCTGGATGTTGTAGTCGGAGAGGGTACGGCCA 928139
Query 46439 TCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTG 46498
|| || ||||||||||| ||||| || | | ||||||||| | || | || ||||||
Sbjct 928138 TCCTCCAGCTGCTTGCCAGCGAAAATGAGCCTCTGCTGGTCAGGAGGGATGCCTTCCTTG 928079
Query 46499 TCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATG 46558
|| |||||| ||||| || | | |||||||| | ||||| || | ||||||
Sbjct 928078 TCTTGGATCTTGGCCTTGACATTCTCAATGGTGTCGCTGGGCTCCACCTCAAGGGTGATG 928019
Query 46559 GTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCATTTT 46596
|| ||||||||||| || || || ||||| ||||||||
Sbjct 928018 GTCTTGCCCGTCAGGGTCTTGACGAAGATCTGCATTTT 927981
Score = 104 bits (114), Expect = 3e-17
Identities = 152/215 (71%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 46379 CGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCG 46438
||||| || || |||| || |||||| ||||| |||||||| || || || || |
Sbjct 928794 CGCAAGACAAGGTGCAGAGTTGACTCCTTCTGGATGTTGTAGTCAGACAGGGTACGGCCA 928735
Query 46439 TCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTG 46498
|| || ||||| || || || || |||| | ||||||||| | || | || |||||
Sbjct 928734 TCCTCCAGCTGTTTCCCAGCAAAGATCAGCCTCTGCTGGTCAGGAGGGATGCCTTCCTTA 928675
Query 46499 TCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATG 46558
||| |||||| |||| | | | ||||| || | || || |||| |||||
Sbjct 928674 TCCTGGATCTTGGCTTTGACATTTTCAATGGTGTCACTGGGCTCGACTTCCAGAGTGATT 928615
Query 46559 GTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
|| ||||||||||| || || |||||||| |||||
Sbjct 928614 GTCTTGCCCGTCAGGGTCTTGACAAAGATCTGCAT 928580
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 565217676947160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |